| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0271 |
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| Symbol | |
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| ID | 5609626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 307242 |
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| End bp | 308222 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640931097 |
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| Product | alcohol dehydrogenase |
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| Protein accession | YP_001472012 |
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| Protein GI | 157373412 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR02823] putative quinone oxidoreductase, YhdH/YhfP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000478762 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTCAAAG CACTGGTATT AACACAAGAA GATAGGGTTA CGTTAGCTAA TATTTGTCAA
CTTCCAGAGA CTGACTTGCC TGAGGGTGAG GTGTTAGTCG ATGTAGCTTG TTCATCGCTG
AACTATAAAG ATGGTTTGGC TGTGACCGGA ACCGGACGCA TTATCCGTAA TTTCCCTATG
GTGCCGGGTA TCGATTTCGC CGGTGTTGTC AGTGAGTCTG CCGACCCACG CTATAAGGCG
GGTGATAGAG TTATCCTGAC CGGATGGGGC GTAGGCGAAA ATCACTGGGG TGGCATGGCT
GAAAAGGCGC GCGTCAACGC TGATTGGTTA GTGCCTATGC CTGAAGCTTG TTCTGCCGAC
AAAGCCATGA TGATAGGTAC TGCCGGTCTT ACGGCAATGC TTTGCGTGCA GGCACTTCAA
AATGCCAATA TTAAACCTGA GTCGGGTGAT ATCTTAGTGA CGGGTGCCAG TGGTGGCGTA
GGTTCAGTCG CCGTCACCCT GTTATCACGC CTGGGTTATA AGGTCGTGGC CAGTACCGGA
CGCGCCGATG AGAATGCCGA TCTTCTTCGC TCTCTTGGTG CCAGTGAAGT GATGGAGCGT
AGTGAGCTCG AGCAAGATGC AAGACCACTG GAGAAGCAGC GCTGGGCAGG TATCGTCGAT
ACCGTCGGTA ATAAAGTATT AGCGACAGCA TTGGCGCAGA TGCAGTATGG CGGCGCGGCG
GCGATATGTG GTCTGGCTGG TGGATTTGCA CTGCCAACTA CTGTGATGCC ATTTATTCTA
CGTGGTGTCA GCTTGTTAGG AGTCGACTCC GTTTCATGTC CATTTGAAAA GCGCCAGGCG
GCATGGGAGC AAGTGCTTGA GCTGTTACCC GACAGCTACT ATCAACAAGC GGGTCAAACC
ATTAGCCTGG ATCAGGTTCC TGAGTTCGCC GATAAGATAG TTAAAGGACA AGTAACCGGT
CGAGTACTCG TTAAGCTTTA G
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| Protein sequence | MFKALVLTQE DRVTLANICQ LPETDLPEGE VLVDVACSSL NYKDGLAVTG TGRIIRNFPM
VPGIDFAGVV SESADPRYKA GDRVILTGWG VGENHWGGMA EKARVNADWL VPMPEACSAD
KAMMIGTAGL TAMLCVQALQ NANIKPESGD ILVTGASGGV GSVAVTLLSR LGYKVVASTG
RADENADLLR SLGASEVMER SELEQDARPL EKQRWAGIVD TVGNKVLATA LAQMQYGGAA
AICGLAGGFA LPTTVMPFIL RGVSLLGVDS VSCPFEKRQA AWEQVLELLP DSYYQQAGQT
ISLDQVPEFA DKIVKGQVTG RVLVKL
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