| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0254 |
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| Symbol | |
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| ID | 5609693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 287338 |
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| End bp | 288540 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640931080 |
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| Product | Bcr/CflA subfamily drug resistance transporter |
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| Protein accession | YP_001471995 |
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| Protein GI | 157373395 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCGAA ATCTGTTACC CATCTTAATG TCTATGGTTG TGTTAAGTCC CTTAGCCATC
GATATTTACC TGCCTTCCAT GCCAACGATG GCTGCCGAGT TCTCGGTATC GGCAAGTGAG
GTGCAGTCGA CACTGGTACT CTTTTTGTTC GCTATGGGAG TAGGGCAAAT TGTTATAGGT
CCTCTGGCCG ATAGATATGG TCGTCGCCCC ATCGCTCTGG GTGGTATTTT GCTTTATATC
GCCAGCAGTA TACTCGCGGC TGTGGCCATG GAATTTCATT GGCTGCAGAT AGCCAGGGTG
CTTCAGGGGT TAGCTGCTTG TTCTACCTCA ATAGTGGTCT TCAGCGCCGT GCGTGATTGT
TTCACACCCA AAGAGAGCGC ACGCTATTAC AGTTATCTGA ACGGAGTTAT CTGTGTGATC
CCGGCGCTGG CCCCAACTTT AGGTGGCCTA CTGGCAATGC AGTTCGGCTG GCGCTCCACC
TTTGTATTTA TGACGCTTTA TGCCATCGTC ATGATGGTCC TGGTCGGGTA TCGTCTGCCC
GAAACCCGTC CTGCGAACAC TGTGACGACA GGGCCGCTAT ATCGTTGGTC ACGTTACAAG
CCCGTTATCA TAGAGCCACA CTTTCTTTTC TATGCCTTCT CATGCATGGC GGGTATGGCC
GCTATTCTGA GTTATGTCTC ATACGCGCCG GTTTGGATAA TCGAAACTTT AGGCATGTCA
GAGCTGACAT TCAGCGGACT ATTTGGCCTC AATGCCGCGG TTAATATTGT TGCCTGTTTT
GCCGCGCCTA TGGTGATCGC TAAGTTAGGC AATCGACCAA CGGTGATGCT GGCGTTAAGC
ACTATGCTTG TATCGGCTAT CATGCAGGTG CTCTTACAGC AATGGGGACC GGCAACCGGA
CTACCTGCAG CATTAAGCTT TATGTTGCCT ATGATGTTGC TCTGTATCGG CTTCGCCCTG
CTGCTTGGTC CTGCGACGAG TATGGCACTG GCTGCATTCG GTGAACGAGC GGGAACGGCA
ACGGCTATCT TAGGATTTAT TCAGATGAGT GGTGCTTCAC TGCTTACCGG GTTAGTACAG
CAGACAGATC TACCTGCACC CTATGCCGTT GCATTGGTGA TGGGTACTTT GGCGATAACC
CTGTTGACCA TGATGGCTAT GCCCCGTTTC GATAACTGGC ATCAGGAACA ACACGCACAT
TGA
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| Protein sequence | MRRNLLPILM SMVVLSPLAI DIYLPSMPTM AAEFSVSASE VQSTLVLFLF AMGVGQIVIG
PLADRYGRRP IALGGILLYI ASSILAAVAM EFHWLQIARV LQGLAACSTS IVVFSAVRDC
FTPKESARYY SYLNGVICVI PALAPTLGGL LAMQFGWRST FVFMTLYAIV MMVLVGYRLP
ETRPANTVTT GPLYRWSRYK PVIIEPHFLF YAFSCMAGMA AILSYVSYAP VWIIETLGMS
ELTFSGLFGL NAAVNIVACF AAPMVIAKLG NRPTVMLALS TMLVSAIMQV LLQQWGPATG
LPAALSFMLP MMLLCIGFAL LLGPATSMAL AAFGERAGTA TAILGFIQMS GASLLTGLVQ
QTDLPAPYAV ALVMGTLAIT LLTMMAMPRF DNWHQEQHAH
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