Gene Ssed_0234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_0234 
Symbol 
ID5613635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp269290 
End bp269898 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content46% 
IMG OID640931060 
ProductDsbA family thiol:disulfide interchange protein 
Protein accessionYP_001471975 
Protein GI157373375 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAAAC TTCTTTCTAC TGCGGCTATC CTGCTTTCGT TTGGTGCATC CGCGGCCAGC 
TTCACTCAAG GTGAGCATTA CGTTGACCTG GGTGAGGCGG CGTTCAATGC ACCTAATCAA
GTGACCAAAG TTTACTCGGT TAACTGCCCA TTCTGTTACA AATATGAAAA AGCGGTCATA
CCCGGTTTTG TTAAAAACTT GCCGGATGGA GTGAGCTTCG ACTCCTATCA CATCACGACT
AAGCCCCCTT TCGGCAAAGA GAAGGCGACG GTAATAGCGG TGGCTAAGGT ATTGGGCGAT
AAGCAGTATA AAACGGCCAA GATGGCTTAT TACAAACACA TTCATGACGA TAAGAAAAAG
TTTAGCTCTG CCGAAGATGC GATCTCCTTT GGTTTGAAAG CCGCGAAGAT AGATAGTGTG
ACTTTCTCTG CCCACAAGGA TACATCAGAG GTGAAAGCGC TACTGACTCA ATGGGATCAG
GGAGTGGCCG TGGCTAAGGT GAGAGGCATT CCGGCTATCG TGGTTAATGG TAAGTATTTA
ATCAACACAA AAACTATCAC CAGCATGACA ATGCTCGATG AGTTGACTGC TGAACTGTTG
GAGAAATAG
 
Protein sequence
MIKLLSTAAI LLSFGASAAS FTQGEHYVDL GEAAFNAPNQ VTKVYSVNCP FCYKYEKAVI 
PGFVKNLPDG VSFDSYHITT KPPFGKEKAT VIAVAKVLGD KQYKTAKMAY YKHIHDDKKK
FSSAEDAISF GLKAAKIDSV TFSAHKDTSE VKALLTQWDQ GVAVAKVRGI PAIVVNGKYL
INTKTITSMT MLDELTAELL EK