| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0226 |
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| Symbol | |
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| ID | 5613598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 258306 |
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| End bp | 260015 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640931052 |
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| Product | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase |
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| Protein accession | YP_001471967 |
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| Protein GI | 157373367 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase |
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| TIGRFAM ID | [TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATCG ACAAGACAGC AGAGCTAAAT CTATTATGGG GCACTCTTAT ACTCGAGGAG
CTCTCTCGCC TAGGGGTTCA ACATGTGTGT ATGGCTCCTG GCTCACGCTC GACACCTTTA
ACTCTCGCCG CCGCAAAACA ATCTAAGCTT AAACAGCATC TGCATTTCGA TGAGCGCGGG
CTTGGATTTA TGGCACTGGG TCTTGCAAAA ACAAGCCATG CTCCGGTGGC AATTATCACG
ACCTCCGGGA CCGCTGTCGC GAATCTCTAT CCGGCGATAA TCGAGGCCTG GCTAACGCAA
GTACCTTTGG TAGTCTTGTC CGGAGACAGA CCCCCGGAAC TGATCGATTG CGGTGCCAAT
CAGGCCATCA TTCAACCGGC GCTCTTTGCA CAATATGCCA AGCAGATTAA TCTGCCCACA
CCGGATATAG CTATCCGGCC GGAGGCGCTG CTCACCATGT TAGATGAAGC TATCAGCAAT
CAAAGCCTGC CCGTTCATAT TAATTGCATG TTTCGTGAGC CACTTTACCC ATCGACCATG
AGTGCCGACT TTACCCAGTA CCTGAGTACA CTGGGTAATT GGCAGCATAC GACGTCCCCT
TTTAATCAAT ACGGTAAAAC GTCACAGCAC AGCCTGCCAA CCCAAGACTC ATTGGCCCGC
TTTGTTCATG GAAAAGGCGT GATCATTGCC GGCACTCTTT CGCCACAAGA GTCGCCGGAA
ATCCTTGTAG AGCTATCACA GAAACTGGGT TGGCCACTAC TCACCGATGC TCAATCTCAG
CTTAGACAGC ATTCCGGTGT CATTGGTAAT GTGGATCAAC TCCTACACCA ACCCAAAGCC
AGGGCTTTGC TGGCCCAGGC TGAATCTGTG CTGGTATTTG GCGGACGCCT GCTCTCAAAA
CGCCTGATTA ACTTCTTAAG CGAACAGAAA TGGAAGCGCT ATTGGCAGGT ATTACCCCAA
CAGATGAGAT TAGACCCAAG CCACAGTGCT AAGCAGGTAT GGCACTCGAG TGTAGCCGCC
TTCGCTTCAC AAGCCTGGCC GCGATCATCC GACGCCAACT GGGCACTGCA ACTCATCCAG
TTTAATGACG GGCTTGAGAC GCTGTTTCAA CAGCAGATCG ATAATGCCGA GTTTGGTGAG
GCGATGGTCG TCCGTGCAAT AGCTAAAGCA CAAAATCGCC AAAGCCAACT CTTTATCGGA
AATAGCCTGC CGGTACGCTT ATATGACATG TATGCTCCGA TCACTCCTGA CTATCCCCGC
ACCTATACCA ATCGCGGCGC CTCGGGCATC GATGGCCTGC TCGCCACCGC TTGCGGTGTC
GCTAAGCATG AAGGGAAAGC CACCACCTTA CTCATAGGCG ATATATCTCA GTTACACGAC
CTCAACTCTC TGGCCATTGC CCGAACGATT GAGAGCCCTT TTGTCATCGT CATATTGAAT
AATGATGGCG GTAATATCTT TAACTTACTT CCGGTCCCCG ACGAGAAGCT CAGGAGTGAT
TATTACCGTC TGGCCCATGG GCTGGAGTTT GGCTATGGCG CGGCTATGTT CGGCCTGGCC
TACAACCGGG TCGATGACTT CGAGAGTTTC AACGAAGCCT ATCAAGAGGC TATCGCCTTT
CAGGGTCCTT CGGTGATTGA GGTTTCGGTC GCCCAACATC AAGCGAGTGA GCAGATCGCC
AGCATTGCCA CCTGGGTAAA ACAAAGCTGA
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| Protein sequence | MQIDKTAELN LLWGTLILEE LSRLGVQHVC MAPGSRSTPL TLAAAKQSKL KQHLHFDERG
LGFMALGLAK TSHAPVAIIT TSGTAVANLY PAIIEAWLTQ VPLVVLSGDR PPELIDCGAN
QAIIQPALFA QYAKQINLPT PDIAIRPEAL LTMLDEAISN QSLPVHINCM FREPLYPSTM
SADFTQYLST LGNWQHTTSP FNQYGKTSQH SLPTQDSLAR FVHGKGVIIA GTLSPQESPE
ILVELSQKLG WPLLTDAQSQ LRQHSGVIGN VDQLLHQPKA RALLAQAESV LVFGGRLLSK
RLINFLSEQK WKRYWQVLPQ QMRLDPSHSA KQVWHSSVAA FASQAWPRSS DANWALQLIQ
FNDGLETLFQ QQIDNAEFGE AMVVRAIAKA QNRQSQLFIG NSLPVRLYDM YAPITPDYPR
TYTNRGASGI DGLLATACGV AKHEGKATTL LIGDISQLHD LNSLAIARTI ESPFVIVILN
NDGGNIFNLL PVPDEKLRSD YYRLAHGLEF GYGAAMFGLA YNRVDDFESF NEAYQEAIAF
QGPSVIEVSV AQHQASEQIA SIATWVKQS
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