| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0178 |
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| Symbol | |
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| ID | 5610769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 202523 |
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| End bp | 205069 |
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| Gene Length | 2547 bp |
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| Protein Length | 848 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640931004 |
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| Product | peptidase M14, carboxypeptidase A |
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| Protein accession | YP_001471919 |
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| Protein GI | 157373319 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAGAT CCTGTCTGTA TTTTCTAGCG ACTTACTGCT CATTGTCTTT ACTGCTTCCT
GCAATGGCTG CAGAGCCGCA CGACGACAAC GCGATCTTAA CTGCAAAATC CGATACAAGC
CTGACCTCTC CAACTCAGTT TTTAGACTAT CCCCTTGGTC AGTGGCATCT GCGGCATGAC
CAGATAAACT TCTATCTTAA GCAGCTAGCC CTTGAAAGTG CCAAAGTCTC CATCGAAAAG
AGTGGCCAAA GCCATGAAGC CAGGCAGCAA TTAACGGCTG TGATCAGCTC AGCCAAAAAC
CAAGCACGAC TGGATGAGAT TTTACAACAG AGACAAAAAG TTAAGTCAGG TGATGCGCAG
CAGGAGCCCT TAGTGATCTG GCTGGCTTAC TCGATTCATG GTGACGAAGC CAGCGGCGCA
CACGCGGCAT TGAAACTCAG CCATCTACTC GCAAGCAGTA ACGAGCAATG GATTAACCGC
TTACTGGACG AAGCGGTCAT TCTTATCACT CCGAGTCAAA ATCCGGATGG TTTAGATCGA
TTTTCAAACT GGACCAATAA TTACCGTGGT CAGGTGGATG TGAGCGACAG TAACCATAGG
GAGCACAGAC AGAACTGGCC GAGTGGCAGG AGCAATCACT ATTTTGCCGA TCTGAACCGT
GACTGGCTTT TCCTACGCCA CCCGGAATCT CGAGGCAGGA TAGCGCTGTT CCACAAGTGG
CAGCCTCACT ATGTGGGTGA TTTTCATGAA ATGGGACGAG ATCAGAGCTA CTTTTTCCAA
CCCGGCGTCC CCTCTCGCAC TCACCCTTTA ACGCCAAAAG ACAATCAGGC ACTGACTGCA
AAACTAGCCA AGTTTCATCA GCAAGCACTG GATGAGCTCA AACAAAGCTA CTTCAGTCGA
CAGATGTTCG ACGATTTTTA CTATGGAAAA GGCTCAACTT ATCCGGATAT CAACGGATCT
ATCGGTGTAC TCTTCGAACA AGCTAGCCCC AGAGGTCAGG TTCAAGCGAC ACGAAATGGA
GAGTTAAGAC TGCAAGAGGC CATAGATAAC CAAGTTGCGA CCTCAATATC CAGCCTAAAG
GGAGCTTTGG CACTAAAAGA TGAGCTGCTT GAATATCAGA GTGAATTTTA CCAAGGCAGG
GACAAGACAC TGAACAAAGG ACGTCAACAA GGCTTCCTTA TTGGCGCCCC CGCTAATGCA
AATCGAATTT CCGACCTGAG CGCCCTGCTC GACCAACACC ATATCGAGTT TTATTATCTG
ACTAAACCTG TCACCCAAGG CAAGGCAGAT TTTGCCGTGC AAACCAGTCT ATTTATTCCT
GTTAATCAAC CGCAAAAAAG TCTATTGCTG GCCATGTTCG ATAATAGAAC TGAGTTTACC
GATCCTACTT TTTATGATGT TTCCAGTTGG AACCTTGAGC AAGCTTATCA CCTTCAGTTA
ATAAGAAATG CTAAGCTGGA TATCGACGTA TTATCTAAAA AACGGCCTAA ACCGACCGCC
TTCAACGTCG ATGAACAGGC GGTATCCCTG CTCATAAATT GGCAACAGGA TAATGCAGCC
CCCGTTCTTC AACAGTTGTT GCAAGCCGGT ATTCGAACCA AGTTTGCCGG CAAGCCCTTT
ACCATAAGAG TCGATGACAT TGACCTTGCC TTCCCCGCAG GAAGCTTGCA GATTCCACTG
AAACAAAGTG GTAACTCAGC AGAGACAATT ACCACGAAGC TGACAGAGCT GGTTAAGGGA
TATCCGTTAA ATATTACCTC CGTTAACACC AGCAGTTCGG TTTCAGGCAT CGACCTGGGT
AGTCCTGATT TTCACCCTGT TAAACCGATA AAGCCTCTGT TAGTAACAGG GCAAGGAACT
GATGCATCAG AGGTTGGAGA GCTTTGGTAT TACTTAGATA CAAAGTTGGC CGTCCCCCTA
ACACTTGTCG ATGTTGGACG CCTGACACGC CTTACCTTAA GTGACTATAG CCACATTATT
CTACCGGGGG GCAGCTACTC CTCACTCGAT GAGAAGTTCG CACGTAAACT GGGACAGTTT
GCCAAGCTGG GCGGCACCAT TATTGCTCAA AAAGGCGCGC TAACCTGGCT AAATAAGGGT
CACCTCCTTA AAACCGATCT TAAGGAGGCA CGTTTTTATA AGCAGCTGTT TGATAGCACC
AATCTGAGCT TCGCAGACAG AGAGAAGCTT GAGGCCAGGC AGTCAATCGG CGGCGCAATT
CTTGAGTTAA CACTCGATCC CACTCATCCA TTAAGCTTCG GAATACGCGG TAACAGCCTA
CCTATATTGA AGAACAAAGC CTTAGGGCTG ACCGAAACGT CGACCCCCTT CATTGTGGCG
GCCAAATATG CCGAAGAGCC ACTCTTGAGT GGCTATCTCG CCGAAGAATA TCAGCGAAGT
TTCTCTATGA GCCCGGCAAT ACTCCTCGAA CCCAGAGGAA AAGGAGCCAT AGTGATCCTG
GCGGATAATC TAATGTTCCG GAACATCTGG TTGGGATCAG AAAAAATCTA TGCCAACGCC
CTCTATTTTG TACCAGCCCT GGATTAG
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| Protein sequence | MLRSCLYFLA TYCSLSLLLP AMAAEPHDDN AILTAKSDTS LTSPTQFLDY PLGQWHLRHD
QINFYLKQLA LESAKVSIEK SGQSHEARQQ LTAVISSAKN QARLDEILQQ RQKVKSGDAQ
QEPLVIWLAY SIHGDEASGA HAALKLSHLL ASSNEQWINR LLDEAVILIT PSQNPDGLDR
FSNWTNNYRG QVDVSDSNHR EHRQNWPSGR SNHYFADLNR DWLFLRHPES RGRIALFHKW
QPHYVGDFHE MGRDQSYFFQ PGVPSRTHPL TPKDNQALTA KLAKFHQQAL DELKQSYFSR
QMFDDFYYGK GSTYPDINGS IGVLFEQASP RGQVQATRNG ELRLQEAIDN QVATSISSLK
GALALKDELL EYQSEFYQGR DKTLNKGRQQ GFLIGAPANA NRISDLSALL DQHHIEFYYL
TKPVTQGKAD FAVQTSLFIP VNQPQKSLLL AMFDNRTEFT DPTFYDVSSW NLEQAYHLQL
IRNAKLDIDV LSKKRPKPTA FNVDEQAVSL LINWQQDNAA PVLQQLLQAG IRTKFAGKPF
TIRVDDIDLA FPAGSLQIPL KQSGNSAETI TTKLTELVKG YPLNITSVNT SSSVSGIDLG
SPDFHPVKPI KPLLVTGQGT DASEVGELWY YLDTKLAVPL TLVDVGRLTR LTLSDYSHII
LPGGSYSSLD EKFARKLGQF AKLGGTIIAQ KGALTWLNKG HLLKTDLKEA RFYKQLFDST
NLSFADREKL EARQSIGGAI LELTLDPTHP LSFGIRGNSL PILKNKALGL TETSTPFIVA
AKYAEEPLLS GYLAEEYQRS FSMSPAILLE PRGKGAIVIL ADNLMFRNIW LGSEKIYANA
LYFVPALD
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