| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0167 |
|---|
| Symbol | envZ |
|---|
| ID | 5609880 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sediminis HAW-EB3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009831 |
|---|
| Strand | - |
|---|
| Start bp | 189301 |
|---|
| End bp | 190611 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640930993 |
|---|
| Product | osmolarity sensor protein |
|---|
| Protein accession | YP_001471908 |
|---|
| Protein GI | 157373308 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.642764 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTGGC TGAAGAAGTT CCTCCCCCGT AGCGCTTTTA GTCAGACAGT CATGCTGATC
GGTTGTCTGT TGCTGATCAA TCAGCTGGTG TCATACCTTT CTGTGGCCAC CTATTTTATC
CAGCCAACCT ATCAACAGAT CAATCAGTTG ATAGCGCGTC AGGTCAAGTT GCTTTTCGTC
GATGGTGTCG ATATCGGCCG TGAACACCTC ACCATGGTCG ATGCCCTGAA TGCCAAGGTG
CGTGACGATG GCATGGAGAT CTACAATCAG AAGCAGGCAC GGGAAGCGGG TATCGATCAG
GCCGTATATT ATGGCTTCTT GTCATCACAG ATGTCTGAGC ACTTAGGAGG AAAAGCCGAA
GTTAAGATAG CTCAGGGAGA TGATTTTGAG ATCTGGATCC GCCCTCCTCA GGCTCCCTCT
ATCTGGATAA AGGTTCCCTT AACCGGTTTC AACGAATCAG ACTTGTCCCC ACTCACCCTC
TATCTGATGG TAATTGGTGC ATTGAGTGTC GCCGGCGGAT GGTGGTTTGC CAGACAACAA
AACAGGCCCC TCAAAAAGCT TCAAAAAGCG GCAATATCGG TCTCGATGGG CGACTATCCC
GAGCCATTGC CTCTCACAGG CTCCACCGAA ATAGTCGAAG TGACCAACGC CTTTAATCAG
ATGTCCCATA GCATGAAACA GCTCGAACAG GACAGGGCCC TGTTGATGGC GGGGATATCC
CATGATCTTC GCACGCCACT GACCCGCATC CGTCTGGCCT CTGAGATGAT GGTTGAAGAA
GATGAGTACC TCAAAGACGG CATAGTGCAC GATATCGAAG ATATGGATGC CATCATCAAT
CAGTTTATTT CCTATATCCG CCAAGATCAG GAAAGCACCC GGGAACAGGG ACAGCTTAAC
GATTTGATAG AGGATGTGGT GCAGGCCGAA TCGAACCGAG AGGCAAAGAT TGAAGTCGAA
CTCAATGAAT GCCCCGAGAT CCCCATGCAG AGCATCGCCA TCAAGCGCAT ACTCAGTAAC
CTGGTCGAAA ATGCCTTTCG ATATGGTAGA GGCTGGGTAA AACTGAGCTC TCATTTCGAT
GGCAAACGGG TGGGTTTCAG TGTCGAAGAC GATGGCCCCG GCATTCCGGA AGATCAAATC
CCCAAACTGT TTCAACCTTT TACTCAGGGA GATACGGCGA GGGGCAGCGT GGGCTCGGGT
CTGGGGCTTG CCATCATCAA ACGAATTACC GATCGCCATC AGGGGGAAGT CGTACTCACC
AATCGAGCCG AAGGGGGTTT ACGCGCTCAG GTTTGGTTAC CTATGGAGTA G
|
|---|
| Protein sequence | MKWLKKFLPR SAFSQTVMLI GCLLLINQLV SYLSVATYFI QPTYQQINQL IARQVKLLFV
DGVDIGREHL TMVDALNAKV RDDGMEIYNQ KQAREAGIDQ AVYYGFLSSQ MSEHLGGKAE
VKIAQGDDFE IWIRPPQAPS IWIKVPLTGF NESDLSPLTL YLMVIGALSV AGGWWFARQQ
NRPLKKLQKA AISVSMGDYP EPLPLTGSTE IVEVTNAFNQ MSHSMKQLEQ DRALLMAGIS
HDLRTPLTRI RLASEMMVEE DEYLKDGIVH DIEDMDAIIN QFISYIRQDQ ESTREQGQLN
DLIEDVVQAE SNREAKIEVE LNECPEIPMQ SIAIKRILSN LVENAFRYGR GWVKLSSHFD
GKRVGFSVED DGPGIPEDQI PKLFQPFTQG DTARGSVGSG LGLAIIKRIT DRHQGEVVLT
NRAEGGLRAQ VWLPME
|
|---|
| |