| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0128 |
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| Symbol | |
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| ID | 5612343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 142834 |
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| End bp | 143499 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640930954 |
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| Product | hypothetical protein |
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| Protein accession | YP_001471869 |
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| Protein GI | 157373269 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1738] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00697] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.517941 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTAACGT TAACAAATGC GCAAATTCGC CGTGCACTGC TGGTGCTTGT CGGCTTCCAC
ATACTGATCA TATGCGCCAG TAACTATTTG GTTCAACTGC CTTTTCAGAT ATTTGAACTT
CATACTACCT GGGGAGCATT CAGCTTTCCA TTCGTCTACC TTGCTACCGA TCTCACCGTC
AGAATTTTCG GTCAAAGCGC GGCCAGGCGC ATCATTCTAA AAGCGATGAT TCCAGCCTTG
CTTATCTCAT ATTTAATGGG CGTTATTTTT CATCAGGGCA GCTTTCAAGG CTTCACAGCA
CTATCTGAAT TCAATAACTT TGTTTTTCGT ATTGCCTTCG CCAGCTTCGC CGCCTACCTC
ATTGGCCAGC TCATGGATAT CACCGTCTTC GCCAAATTAA GAAATACGCA ATCTTGGTGG
GTAGCACCTG CAGCATCGAC CCTTATCGGT AACCTGGTTG ATACCTTGGT TTTCTTCTCG
CTAGCTTTTT ACGCCTCCAG CGATAGCTTT ATGGCTGCAC ATTGGCCTGA AATAGCCAGC
GTCGACTATG GCTTTAAACT GATTGTAAGC TTAGGGTTGT TTCTACCGGC ATATGGCGTG
CTATTAAAGG TACTGGAACG AAAAATCGTA AAATTACCAA CTCAACAAGA ACTGGCCACT
AACTAA
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| Protein sequence | MLTLTNAQIR RALLVLVGFH ILIICASNYL VQLPFQIFEL HTTWGAFSFP FVYLATDLTV
RIFGQSAARR IILKAMIPAL LISYLMGVIF HQGSFQGFTA LSEFNNFVFR IAFASFAAYL
IGQLMDITVF AKLRNTQSWW VAPAASTLIG NLVDTLVFFS LAFYASSDSF MAAHWPEIAS
VDYGFKLIVS LGLFLPAYGV LLKVLERKIV KLPTQQELAT N
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