| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0113 |
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| Symbol | |
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| ID | 5612450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 127008 |
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| End bp | 127427 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640930939 |
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| Product | cytidyltransferase-like protein |
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| Protein accession | YP_001471854 |
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| Protein GI | 157373254 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0615] Cytidylyltransferase |
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| TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTAAAA AAGTTTTAGT GGTCGGTGTA TTCGATCTTT TTCATCGAGG TCATGTCGAG
TTCCTTCAGA AAGCCTCAGA ATTTGGTGAT GAACTCATTA TATTGATTAA TGGCGATGAG
ATGACCGAAA AATATAAGCG GCGTCCAATA TATAGTGAAG ATGATAGGGC AACTATTCTC
AATGCGCTCA GCTGTGTTTC ACAGGTCGAA GTCACCAATA GTTTTGATAT CAAACCTATT
ATTGAAAAAT ACAATATCGA CGTCATTGTT CATGGTGATG ACTGGGAACA TGAATCATAT
TTAGCACAAA TTCGGTGCAC TCAATCATAT CTTGACGAGC AAGGTGTAAG CCTAGCCTAT
ACTGAATATC ATAAATCTGT CAGTACCAGC ACCTTACTAA AACAGATCAA GGAGGCATAA
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| Protein sequence | MSKKVLVVGV FDLFHRGHVE FLQKASEFGD ELIILINGDE MTEKYKRRPI YSEDDRATIL
NALSCVSQVE VTNSFDIKPI IEKYNIDVIV HGDDWEHESY LAQIRCTQSY LDEQGVSLAY
TEYHKSVSTS TLLKQIKEA
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