| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0084 |
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| Symbol | |
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| ID | 5613251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 92434 |
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| End bp | 92703 |
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| Gene Length | 270 bp |
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| Protein Length | 89 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640930910 |
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| Product | export protein FliQ |
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| Protein accession | YP_001471825 |
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| Protein GI | 157373225 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1987] Flagellar biosynthesis pathway, component FliQ |
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| TIGRFAM ID | [TIGR01402] flagellar biosynthetic protein FliQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.85693 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAGTTA ACGAGCTGAC CTCTATCTTT TCCGATGCCA TCTATTTGGT GGTTGCCATG
GTTGGCGTTT TGGTTGTTCC TAGCCTGTTG GTGGGATTGA TTATTGCGGT GTTTCAGGCG
GCGACACAAG TTAACGAGCA AACGCTCAGT TTCTTACCCA GACTGGTGCT GACTCTCTTA
ATGGTGTTGT TCTCCGGACA GTGGCTATTG CAACAGATCT CAGATCTGTT TGATCGCCTG
TTTATGAACA TCCCCCACAT CATAGGTTAA
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| Protein sequence | MEVNELTSIF SDAIYLVVAM VGVLVVPSLL VGLIIAVFQA ATQVNEQTLS FLPRLVLTLL
MVLFSGQWLL QQISDLFDRL FMNIPHIIG
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