| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0080 |
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| Symbol | |
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| ID | 5613446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 88607 |
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| End bp | 89521 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640930906 |
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| Product | hypothetical protein |
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| Protein accession | YP_001471821 |
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| Protein GI | 157373221 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.580583 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAATCT CTGCTCATAT AAAACTCTAC TCACTGTCTT TTTTTCTGCT TATATCGAAT
ATTGCAACAG CAAGTAGTAC CCGCTATCAA ACTCCTTTAG AGCAGGCCAA ATGGGACTTC
ACCGGAAATC GCTTTATTTG CCAGATTGAA CATAAGGTAA ATGGCTTTGG CGAATTTAAA
TTGATCGCGA GACCAGGTAC ATCTCTGAGC CTGCAGCTCG ATGCAGATTG GCTCTCCTTT
GAACAAACGA CGAGCCAGGC AAAGGTGGTT TCTCCGTCAT GGAGTCAAAC CGATAGCTTA
AGTTCCGGAG CTACCCACCT GAAATGGCAT GGTCGAACTG CCATCAGCGA TGACACAACA
AGCAAATTTT TAGAAGCCTT AGAGCAAGGG CTTGCCTGGC AGGTCTTAAT TCTGGCCCGT
GACGGTATCT CATATAAGGT AGAAACCAGC CCCATTAATA CTCAGGCTAT TGCGAATAAG
TTCAAACTTT GTCGTCAAGA ATTACTGCCA AAACCTTTCT CATATGTTCG CCGTGTCGAT
ATCCAATTTG AATCGGGCAC CAGTAAGCTC ACCGCTGCAC ACGAAGTCGA TTTAGAGGCT
ATTGCACAAT ATGTTCAAGC CGATGCGACA GTGAAGGAAA TTTTGGTCGA TGCACACGCC
GATGCTTCCG GTGAGCACTT AGCCAATTTG GTATTAAGCA AAGAGAGAGC CGACGAGGTG
GCATCCCGTC TATTTGAGTT GGGCATTCAG AAACAAAAAA TTCAGGTTCG CCATCATGGT
GCCCGCTCTC CAATAGTCAG TAATAACAGC CCTGAAGGAA GAGAGATAAA TCGCAGGGTC
ACGATTCGTT TAATTAAGTC CCACACTAAG ACTGCGAACA GTAACCCAAC CGGAGTTAAC
AATGCCTCTC TCTAA
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| Protein sequence | MKISAHIKLY SLSFFLLISN IATASSTRYQ TPLEQAKWDF TGNRFICQIE HKVNGFGEFK
LIARPGTSLS LQLDADWLSF EQTTSQAKVV SPSWSQTDSL SSGATHLKWH GRTAISDDTT
SKFLEALEQG LAWQVLILAR DGISYKVETS PINTQAIANK FKLCRQELLP KPFSYVRRVD
IQFESGTSKL TAAHEVDLEA IAQYVQADAT VKEILVDAHA DASGEHLANL VLSKERADEV
ASRLFELGIQ KQKIQVRHHG ARSPIVSNNS PEGREINRRV TIRLIKSHTK TANSNPTGVN
NASL
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