Gene Ssed_0076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_0076 
SymbolfliG 
ID5613481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp84057 
End bp85070 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content50% 
IMG OID640930902 
Productflagellar motor switch protein G 
Protein accessionYP_001471817 
Protein GI157373217 
COG category[N] Cell motility 
COG ID[COG1536] Flagellar motor switch protein 
TIGRFAM ID[TIGR00207] flagellar motor switch protein FliG 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATAAGA GTGAACTTGG AATAAAGATG GATAACCTGG AGCAAGCAGC CATGTTGTTG 
CTTAGCATGG GAGAGAAGGG AGCCGCTCAG GTGATGGCAC ACCTGGACAG AAATGATGTT
CAACACCTGA GCCACAAGAT GGCCCGCTTA TCGAGCATTA CCCAACAGGA AGCAGAAGCG
GTACTCGGAC GTTTCTTTAT GCGCTACCAG GAGCAATCCG GTATCGCCAG AGCATCTCGC
TCATACCTGC AGAAGACTTT AGATCTTGCG CTGGGCGATC GTGTCGCAAA AAGCCTCATA
GACAGTATTT ACGGTGACGA AATTAAAACC TTAGTCAAAC GTTTAGAGTG GGTAGACCCG
CAGCTGTTAG CCAGAGAGAT CACCAATGAG CACAGTCAGC TCCAAGCCGT ACTGCTTGGC
CTGCTCCCAC CGGAGAGTGC AGCTCAAGTG CTCCTTAGCC TTCCAGCAGA AGGTCAGGAT
GAGGTGTTGG TCCGTATCGC TCAACTCGGT GAACTCGACA GAGATGTCGT CGATGAGCTA
AGGCAACTGG TCGAGCGCTG CATGTTAATC GCCATGGAGA AGAGCCATAC TCAAGTCGCC
GGCATTCGTC AGGTTGCAGA TATTCTCAAC CGCTTTGAGG GCGACAGAGA GCAACTGATG
GATATGATAA AACTCCATGA TACAAAATTG GCCAGTGATG TCGCCGACAA CATGTTTGAT
TTTATTATTC TTGGAAGACA GAAGCCTGAA ACTCTGCAGG AGATCATGGC AATCGTCCCT
CCAGAGATGT TGGCATTAGC ACTGAAGGGG ATCGATTCAG AACTCAAATC CACCCTACTC
CTTGCCCTGC CAAAACGTAT GTCATCGGCA ATTGAGACGC AAGTTGAAGC CATCGGCGCC
GTTCCCCTAA GTCAGGCGAC CAGTGCCAGA AAGGAGATCA TGGAGTTAGC CAAGCAGATG
ATGGATGACG GTGAGATTGA GCTACAACTA TTTGAAGAGC AGGTGGTCGA ATAA
 
Protein sequence
MNKSELGIKM DNLEQAAMLL LSMGEKGAAQ VMAHLDRNDV QHLSHKMARL SSITQQEAEA 
VLGRFFMRYQ EQSGIARASR SYLQKTLDLA LGDRVAKSLI DSIYGDEIKT LVKRLEWVDP
QLLAREITNE HSQLQAVLLG LLPPESAAQV LLSLPAEGQD EVLVRIAQLG ELDRDVVDEL
RQLVERCMLI AMEKSHTQVA GIRQVADILN RFEGDREQLM DMIKLHDTKL ASDVADNMFD
FIILGRQKPE TLQEIMAIVP PEMLALALKG IDSELKSTLL LALPKRMSSA IETQVEAIGA
VPLSQATSAR KEIMELAKQM MDDGEIELQL FEEQVVE