Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0075 |
Symbol | fliH |
ID | 5613480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 83299 |
End bp | 84057 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640930901 |
Product | flagellar assembly protein H |
Protein accession | YP_001471816 |
Protein GI | 157373216 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1317] Flagellar biosynthesis/type III secretory pathway protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATTCC CGGTAGATAA AATGGATCCT AAGTGGCGCC TGAAGAAAGA GCTGGCACGC CGTCATCGAT TTGCCCCCTT AGTTCAGCAG CCCCCGATGG AAGGCGAGGC CGGTACCGGC TGGCAAGACT ATCAGGAAGC GTTCGATAAA GGTTATGAAG AGGGAGTCGC CAAGGGGCAT TTGGAGGGCT TCGAGTCGGG CTCAGAAGAG GGACGTCGCT CAGGCCATGC AAGCGGATTC AATCAGGGGC GAATAGAGGG AAACCTAAAG GGTAAGGAAG CTATCGATGA GCAACTCAAT CAGCTTATCG CTCCCCTGGG TGCACTTAAA TCAATTCTGG AGGAGGGCCA CACTCATCAG GTCTCACAAC AACAGACCAT GTTACTCGAC CTGATTAGAC GCGTCGCCCA ACAAGTGATC CGCTGTGAAC TCACCCTGCA GCCACAACAG ATCTTATCTC TGGTCGAGGA GACATTAACG GCCCTTCCGG ATACGCGCTC CGAGATAAAA ATTCACCTGG AACCCAATGC CGTTAATAAG CTCAAAGAGC TGGCATCAGA TAAGATACAA GACTGGACCT TAGTCGCCGA TCCGAGCATA TCTGCCGGCG GCTGCCGGAT AGTGAGCGAC AAATCTGATG CTGACGCCTC GGTTGAAACC CGGCTGAATG TTTGTATGGA TCAGGTCTCG GCTAAGCTCA AAGAGCCGGA AACAAGCAAC ACAAACAGCG AAGCTGAGCT CCCTATCGAT GTTGCATAA
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Protein sequence | MTFPVDKMDP KWRLKKELAR RHRFAPLVQQ PPMEGEAGTG WQDYQEAFDK GYEEGVAKGH LEGFESGSEE GRRSGHASGF NQGRIEGNLK GKEAIDEQLN QLIAPLGALK SILEEGHTHQ VSQQQTMLLD LIRRVAQQVI RCELTLQPQQ ILSLVEETLT ALPDTRSEIK IHLEPNAVNK LKELASDKIQ DWTLVADPSI SAGGCRIVSD KSDADASVET RLNVCMDQVS AKLKEPETSN TNSEAELPID VA
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