Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0072 |
Symbol | |
ID | 5613954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 81067 |
End bp | 81504 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640930898 |
Product | hypothetical protein |
Protein accession | YP_001471813 |
Protein GI | 157373213 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAATA AAAGAGAGAT TGTTCAATCG ATTATTCGTG GTATTCGTCA GGATATCGAA GGTTATAAGC AACTTAAAAG CATGTTGAAA CGTCAAAGAG ACTTGATGCA ACGACGCGAT AATCACGGAC TTAAGTATCA CAATGGCCAC CAAACGACGC TGTGTGAACA TCTTCAGCAG CGAGCTAAGC TTCGAAGTGA AGGGCTTATC AGCTTAGGGT TTGCGGGGGA TGCCAGTGGT ATGGCACAAC TTATCGCCAA GCTACCGGCT CAAGCATCGA CTCAGATGAA GCTGTTATGG GAAAACCTGT TGATCTTGGT CAAAGAGAGT CAGCGGGTGA ATGAAGCCAA TGGTAAGCTG TTAGTCGGTC AACAAGAGGT GATAACTAAC TTATTGAATC GAGATGTTCC GCAAAATATA GACTATGGTG CGCCGTAA
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Protein sequence | MSNKREIVQS IIRGIRQDIE GYKQLKSMLK RQRDLMQRRD NHGLKYHNGH QTTLCEHLQQ RAKLRSEGLI SLGFAGDASG MAQLIAKLPA QASTQMKLLW ENLLILVKES QRVNEANGKL LVGQQEVITN LLNRDVPQNI DYGAP
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