| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0070 |
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| Symbol | |
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| ID | 5613952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 79958 |
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| End bp | 80704 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640930896 |
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| Product | SAF domain-containing protein |
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| Protein accession | YP_001471811 |
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| Protein GI | 157373211 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1261] Flagellar basal body P-ring biosynthesis protein |
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| TIGRFAM ID | [TIGR03170] flagella basal body P-ring formation protein FlgA |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTTACG TGTTTATTGT GAGGTGGAGA GGAATAGCCG CTTCCTGTTT TCTGATGCTT
CTTTCCTGTT TACTTCCGCT TAGGGCTGGT GCGGAAGAAT CGCTCGATGT AAAGCTGCAG
ATAGAAAACC AACTGACGCG GCTGCTGAGT CAAGAGATCG CCCAATGGCA GCGACAAGCG
GGTCTGAAAT CGGTAGAGCA TAATATTGAG GTGAGGGTGC CCTCGGGGGC CGCCAAGCTC
AAGCTTTGTC CCGAGCCATT GCTGATAGAT ACGGGGAGCG GACTGGTATT TGGCAATGTG
CAACGTAAGG TTTTATGTGC TTCCCAAGCC TGGTCCCTGT TTGTGAGGGC TAAGGTAAAA
GTGACGGCCA GGCTACCTGT AGCGAACAGA GCCATGAAGC GAGGCGAGTT TATCGGAGCA
CAAGATATCG AATGGCACCC GATAGTCTTA GGGGCTTCAG ACAGGGACTT GCTCACCAAA
ACCGATGATA TTATCGGTCG CCAGGTGAAC CGAAAATTAC GCCGACACAG GGCAATTCAG
TTGCATCATC TGAACGCACC TCAATGGGTA AATATTGGTG ATAGGGTGAT CATAGAGGCC
CGCAGTCAGG GCTTTTACGC CAATATGGCG GGGGAGGCTC TCGAGTCTGG CGGCGAGGGG
GAGGCTATCC GGGTTAAAAA TTTGAGTTCG GGTAAGGTGA TCACCGCATT TCCGACGGCA
AAGGGGCGAG TCACGACAGT ATTTTAA
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| Protein sequence | MGYVFIVRWR GIAASCFLML LSCLLPLRAG AEESLDVKLQ IENQLTRLLS QEIAQWQRQA
GLKSVEHNIE VRVPSGAAKL KLCPEPLLID TGSGLVFGNV QRKVLCASQA WSLFVRAKVK
VTARLPVANR AMKRGEFIGA QDIEWHPIVL GASDRDLLTK TDDIIGRQVN RKLRRHRAIQ
LHHLNAPQWV NIGDRVIIEA RSQGFYANMA GEALESGGEG EAIRVKNLSS GKVITAFPTA
KGRVTTVF
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