Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0069 |
Symbol | flgB |
ID | 5610629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 79521 |
End bp | 79871 |
Gene Length | 351 bp |
Protein Length | 116 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640930895 |
Product | flagellar basal body rod protein FlgB |
Protein accession | YP_001471810 |
Protein GI | 157373210 |
COG category | [N] Cell motility |
COG ID | [COG1815] Flagellar basal body protein |
TIGRFAM ID | [TIGR01396] flagellar basal-body rod protein FlgB |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTATCA ACCTCGATGC CGCACTGGGT ATTCATCCCC AAACGCTCGA TTTTAGAGTC GAACGAACCA AGATACTAGC AGGCAATCTG GCAAATGCCG AGACCCCTGG TTATAAAGCT AAAGATCTTA ATTTTCAAGC ACTCATGTCA GGTATTAACG CCGGTATGCC CGCCAGCAAT CAATATGAAG TGGGTTACCG GGTGCCGTAT CAGACCTCTG CCGACCAAAA CACGGTCGAA CTAGGCAAGG AGCAGGCAAG GTACTCACAA AATGCGATGG ATTACCAAAC CAGCCTGACC TTTCTCAACA TGAAGATTTC GGGACTCAAG TCAGCCATCG AAGGGCAATA G
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Protein sequence | MAINLDAALG IHPQTLDFRV ERTKILAGNL ANAETPGYKA KDLNFQALMS GINAGMPASN QYEVGYRVPY QTSADQNTVE LGKEQARYSQ NAMDYQTSLT FLNMKISGLK SAIEGQ
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