| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0066 |
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| Symbol | flgE |
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| ID | 5610626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 77047 |
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| End bp | 78243 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640930892 |
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| Product | flagellar hook protein FlgE |
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| Protein accession | YP_001471807 |
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| Protein GI | 157373207 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1749] Flagellar hook protein FlgE |
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| TIGRFAM ID | [TIGR03506] fagellar hook-basal body proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTTCA ATATCGCATT AAGCGGATTA CAAGCCACAA CACAAGATCT CAATACCATC
AGTAACAATA TCGCCAACTC CTCCACCGTT GGATATCGTG GTGGTCGCAG TGAATTTTCG
GCAGTCTACA ACGGCGGTCA GGCCGGCGGT GTCAACGTCA TGTCCACCAG CCAAAACTTC
TCAATGGGTG GCAGCCTGGT CTATACCGGC CGTGAGCTGG ATATGGGAAT TCAGGGTGAT
GGCTTCTTCG TGCTTAGCGG ACAAGATGGC AGCACGCTGT ACTCCAGAGC GGGCATGTTT
TCACAAGATG CCGACGGCTA TATTACCGAT CCCGCCGGCA ACCGTCTGCA GGGTTACCCG
GTTGGGGCTG GCGGGCAACT GCAAACCGGC AATGTGAGTG ATCTCCAGGT GCAGTCCGGT
TCCCTCCCCG CTAAAGCCAC CACAGATGTG GGGGTTGTCT CAAATTTAGA TGCCAGCATG
GAACCGATAG ACCAGACCAC CACCCCGTTC GACCCGGATG ATATCTCCAG CTACCACTCA
TCTGGCACCG TCGCCGTCTA TGACTCCCTG GGCAACGAAC ATGCTCTGAC CCAATATTAT
GTCAAAACCA ACGATAGCCC AAGCGAGTGG AATGTCCACT ACATGATGGA TGGCAAAGAT
GTTGGAACCA ACAAACTTGA ATTCGATGAT AAGGGCGCAC TCACCGGTGG TGAAAATGTC
ACATTAAACT TAGGAACCCC TGGCGGGGCT GCCCCCATGA GCCTGGATCT GAGCTACAAG
AACAGCACTC AGTACGCCTC CGACTACAGC AATTCAAGCC TGACTCAAAA TGGCTACACC
TCGGGTGAGT TAAACGGAGT GCGCTTAGAC GATAACGGCA TGGTCTACGG CACCTACACT
AACGGTCAGG AGCAGATCCA GGGCCAGGTC GTATTGGCCG ACTTCAATAA CCCTAATGGT
CTTACGCCCG TAAGCAACAA TGCCTGGGCA GCGACGAACG CTGCAGGACA ACCGATCGTA
GGCGCACCGA CAACCGGCAC ATTAGGCTCG GTCAGTGGCG GTTACCTCGA GGGTTCTAAT
GTCGATACCA CGGCAGAGAT GGTCAGTCTG ATGACGGCAC AGCGCAACTA TCAATCGAAC
GCCAAGGTGC TGGATGCCAA CTCAACCATG CAGCAAGCCC TGCTGAACGC CATCTAA
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| Protein sequence | MSFNIALSGL QATTQDLNTI SNNIANSSTV GYRGGRSEFS AVYNGGQAGG VNVMSTSQNF
SMGGSLVYTG RELDMGIQGD GFFVLSGQDG STLYSRAGMF SQDADGYITD PAGNRLQGYP
VGAGGQLQTG NVSDLQVQSG SLPAKATTDV GVVSNLDASM EPIDQTTTPF DPDDISSYHS
SGTVAVYDSL GNEHALTQYY VKTNDSPSEW NVHYMMDGKD VGTNKLEFDD KGALTGGENV
TLNLGTPGGA APMSLDLSYK NSTQYASDYS NSSLTQNGYT SGELNGVRLD DNGMVYGTYT
NGQEQIQGQV VLADFNNPNG LTPVSNNAWA ATNAAGQPIV GAPTTGTLGS VSGGYLEGSN
VDTTAEMVSL MTAQRNYQSN AKVLDANSTM QQALLNAI
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