| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0060 |
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| Symbol | |
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| ID | 5610970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 71640 |
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| End bp | 73013 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640930886 |
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| Product | flagellar hook-associated protein FlgK |
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| Protein accession | YP_001471801 |
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| Protein GI | 157373201 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1256] Flagellar hook-associated protein |
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| TIGRFAM ID | [TIGR02492] flagellar hook-associated protein FlgK |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATGC TAAATATTGG TATGTCTGGG CTGAATGCGA GTATGGCAGC CCTGAATACG
ACCTCAAACA ATGTTGCCAA TGCTATGGTG CCTGGTTATT CACGCCAACA GGTGATGATG
AGCTCTGTCG GCAGCGGAAC CTATGGTGGT GGCGCAGGGG TCATGGTTGA TGGCGTGCGA
CGTATTTCGG ACCAGTATGA GGTGGCTCAG TTGTGGAATA CCACCAGCGA TGTAGGCTTC
AGCAAGGTAC AGGCCAGTTA TTATGGTCAG GTTGAGCAAA TTTTTGGCTC CGATGGTAAC
AACATCTCTC AAGGTCTGGA TCTGCTTTTC GCTTCGCTGA ACTCGGCCAT GGAGCAACCC
AATGAGATAG CCTATCGCCA AGGCGTATTG AATGAAGCAA GGGCATTAAC TCACAGGTTT
AACTCCATCA GCGAGGGGGT CAATGCACAA TTATCTCAGA TCGAGGGACA GCTAGGCGCC
TCGGTTAAAG AGGTGAATGC TCAACTACAG ACCATAGCCA GCTTCAATGC CGAAATCCAG
GCATCCGGCA ACAATGGCAA TGTGCCCTCA TCTTTGTTAG ATGCCCGCGA TGCCGCCGTC
GATGACTTGG CCGCCATTGT CGATATCAAT GTGGTCGAAG ACTCTAATGG CATGCTCAAC
ATCTCTCTGG CACAGGGACA ACCTCTGCTG GCAGGAACCA CGGCTTCGAC TTTGAGTGTC
TCACCCGATC CAGGCAACCC GGGAATGAGT AAGATCAGCA TTCAATTTGG CCAGTCGAGC
TTTCCTGTAG ATGAAAGTGC AGGAGGGAGC TTAGGTGCCC TGCTCGATTA TCGCGATAAC
AGCTTGATGG ACTCGATAGC CTTTATCGAC GAGTTAGCCA TGACCATAGC CGATGAGTTC
AATGCCGTAC TGGCGGGAGG CACAGATCTT AACGGCAATA CACCGACACA AGACCTGTTT
ACCTACGATC CGAACAGCCC AGCCGGCAGT CTCAAGTTGA CCTCAGGATT TACCGCCGAA
ATGCTGGCAT TCGGCCAGGA TGGTACTCCG GGTGATAACA GTAACCTCAA AGAGTTGGTC
GAGCTGGCCA ATAAAAGCTT CACCTTCAAC TCAATCGGCG CAGACACGAC TATGGGGGAT
GCCTTCGCCA GCAAGATAGG TGAACTGGGC TCCGCATCTC GTCAGGCACA GGTAAACGCC
GACACCAGCG TGAAGTTACA GATGGAGGCT CAGTCTCAGT GGGCAAGCAC CAGCGGCGTC
AATATGGATG AAGAGGCGGT AAACCTGATC ATCTATCAGC AATCCTATCA GGCAAATGCC
AAGGTGATAT CGACTGCCGA CCAACTATTC CAAACCATTC TCAACAGCAT TTAA
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| Protein sequence | MSMLNIGMSG LNASMAALNT TSNNVANAMV PGYSRQQVMM SSVGSGTYGG GAGVMVDGVR
RISDQYEVAQ LWNTTSDVGF SKVQASYYGQ VEQIFGSDGN NISQGLDLLF ASLNSAMEQP
NEIAYRQGVL NEARALTHRF NSISEGVNAQ LSQIEGQLGA SVKEVNAQLQ TIASFNAEIQ
ASGNNGNVPS SLLDARDAAV DDLAAIVDIN VVEDSNGMLN ISLAQGQPLL AGTTASTLSV
SPDPGNPGMS KISIQFGQSS FPVDESAGGS LGALLDYRDN SLMDSIAFID ELAMTIADEF
NAVLAGGTDL NGNTPTQDLF TYDPNSPAGS LKLTSGFTAE MLAFGQDGTP GDNSNLKELV
ELANKSFTFN SIGADTTMGD AFASKIGELG SASRQAQVNA DTSVKLQMEA QSQWASTSGV
NMDEEAVNLI IYQQSYQANA KVISTADQLF QTILNSI
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