Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0055 |
Symbol | |
ID | 5610314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 66124 |
End bp | 66504 |
Gene Length | 381 bp |
Protein Length | 126 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640930881 |
Product | flagellar protein FliS |
Protein accession | YP_001471796 |
Protein GI | 157373196 |
COG category | [N] Cell motility [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1516] Flagellin-specific chaperone FliS |
TIGRFAM ID | [TIGR00208] flagellar biosynthetic protein FliS |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAATG AGCATGACCC CTTTAATGCA TATAAACAGA CCAGCCTCGA TGCCAGGGCT GCAGCGGCGA ATCCTCACGA GATGGTACGC ATGTTACTCG ATGGTCTTTT AGATGAGATA GAGCGGGCAA GCGGCTTTAT GCAGAGGCGC AGTTTTGAGG ATAAAGGTAA GAGTATTAAT AAGTGCCTCA ACATAGTACA CGGGCTCGGA TCTATGCTCG ATTTAGAAAA TGGCGGTGAA GTTGCCAGCG GGCTAAACCG CCTCTATGAC TACTGCAGCC GTCAACTCGT TACCGCCAGT GTTGAAAATA ACACTCAAGC TTTAGAACCC ATTACCAAGG TAATTTCGAA TGTCAGAGAA GGCTGGGCCA ACCTCAATTG A
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Protein sequence | MLNEHDPFNA YKQTSLDARA AAANPHEMVR MLLDGLLDEI ERASGFMQRR SFEDKGKSIN KCLNIVHGLG SMLDLENGGE VASGLNRLYD YCSRQLVTAS VENNTQALEP ITKVISNVRE GWANLN
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