| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0049 |
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| Symbol | |
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| ID | 5612892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 61598 |
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| End bp | 62608 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640930875 |
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| Product | OmpA/MotB |
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| Protein accession | YP_001471790 |
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| Protein GI | 157373190 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1360] Flagellar motor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGATTA AAAATGAACC TTTAATCATT AAGAGGCGAA AACGTCAGAA ACGATCCGCG
ACACATGGCG GGGCGTGGAA AGTAGCGTTC GCAGATTTTA CCCTCGCGAT GATGGCCCTG
TTTATGGTTT TGTGGATCTT ACAAATTGCC GATCAGCAAG AACGAACCAT GATAGTGCAA
TATCTTAATG GAGACATGTT TGCCTCTGGC TCAATAAATC CCTTCGACCT GAGCCAATCG
CCATCCATGA TCGATCTCCA GGGATCGATA GCATTGCAGC AAGCCATTAT CCCAGCTACC
GGAACCGGAG TAGAGAAAGC CGGGCCGGCA ATACACAACC ATATACCGGT TGGTGAGGAT
AACGCCAAAG CAGGCAGAGG GCCCGAGCTT AACTCATTAG TCCCTGGAAA ATTTGAGACT
CAGGCTCAAC TCGAGTTTTT AGCCAGAGAG GTCGATAGTG TAATAACAGA GGTTAATCTC
TCGGCAAATG TAGAAATTAA AGTCGTCCCT CAAGGCGTAA GAATACTGAT CCACGATAAC
GTACATCAGT TTATGTTCAC CAGAGGCAGC TCAAATATGA AGCCCTACTT TGAAGACCTG
CTGATGGCAC TCGGTCCATT ATTAGGAGGG GTTGAAAATA AAATCAGCAT CTCAGGACAT
ACCGACTCCA CCCCTTATGC CGGAAAAACA TTCACCAATT GGGAGTTGTC GAGTAAGCGA
GCCCTGTTAG CCAGACGCGT ATTGGAATAC GGTGGCGTAA AACGACATCA GATCATTCAA
GTGACAGGTA TGGCAGATCA ATCTCCATAT ATCCAAAATG ATCCGGCGGC GGCTGCAAAT
AGGCGAATAG AGATGTTGGT ACTAACCACA TCTGCAGAGA AACAGATTAG AGAGATGACT
GGGTTACCAA AAGATGAAAC GCCATCATCA CCAAAACTAA AGCATGCTCA ACAAACAGCC
GAAGCGAATC AACCCAGGAC TCGATATCCA CAGCAGTGGG TAACCGAATG A
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| Protein sequence | MAIKNEPLII KRRKRQKRSA THGGAWKVAF ADFTLAMMAL FMVLWILQIA DQQERTMIVQ
YLNGDMFASG SINPFDLSQS PSMIDLQGSI ALQQAIIPAT GTGVEKAGPA IHNHIPVGED
NAKAGRGPEL NSLVPGKFET QAQLEFLARE VDSVITEVNL SANVEIKVVP QGVRILIHDN
VHQFMFTRGS SNMKPYFEDL LMALGPLLGG VENKISISGH TDSTPYAGKT FTNWELSSKR
ALLARRVLEY GGVKRHQIIQ VTGMADQSPY IQNDPAAAAN RRIEMLVLTT SAEKQIREMT
GLPKDETPSS PKLKHAQQTA EANQPRTRYP QQWVTE
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