Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0021 |
Symbol | |
ID | 5612853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 25322 |
End bp | 25789 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640930844 |
Product | YbaK/EbsC protein |
Protein accession | YP_001471762 |
Protein GI | 157373162 |
COG category | [S] Function unknown |
COG ID | [COG2606] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00011] ybaK/ebsC protein |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0000866016 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTCCTG CAATTGACCT CTTAAAAAAA GCACACATCA AACATACTAT TCATGAATAC CAGCATGAAG CCAGTGCACT GGCCTACGGG ATTGAGGCTG CGACGAAACT CAATCTCGAT GCAAAACTGG TATTTAAAAC TTTGGTGGCC AAACTCGACA GTGGAAAGCT AGTCGTAGCG ATTATTCCGG TTGAAGAGAA ACTTAATATG AAAGCACTTG CAAAGGTAGC TGGAGTTAAG AAGGCCGCCA TGGCCTCGGC TGAGGAAGTC GAACGTTCTA CCGGTTATGT ATTAGGAGGG GTGAGTCCCT TAGGTCAAAA GCGTCCTCTG TTAACCTATA TCGATACCTC GGCAGAGCAA CTCGACCAGC TCTACGTCAG TGGTGGAAAG CGTGGCCTGG ATATAGAACT TACCCCCTCT GCACTGTTAA AACTGACGAG AGCACTGTTT GCCCCCCTCA TCGTCTAG
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Protein sequence | MTPAIDLLKK AHIKHTIHEY QHEASALAYG IEAATKLNLD AKLVFKTLVA KLDSGKLVVA IIPVEEKLNM KALAKVAGVK KAAMASAEEV ERSTGYVLGG VSPLGQKRPL LTYIDTSAEQ LDQLYVSGGK RGLDIELTPS ALLKLTRALF APLIV
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