| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0007 |
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| Symbol | |
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| ID | 5610245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 6220 |
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| End bp | 7320 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640930830 |
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| Product | DNA-directed DNA polymerase |
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| Protein accession | YP_001471748 |
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| Protein GI | 157373148 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000118658 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000000121971 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAAATTTT CAATTGATAG GGATGCCCTA TTAAAGCCGT TGCAACTTGT GACCGGAGCG
GTGGAGAGAC GACATAACTT GCCAATACTG GCAAACCTCT TAGTTGAAGT GAGTGGTCAC
TCACTTAAGA TGACCGGTAC CGATTTAGAA GTCGAATTGG TGGGGCAGGT TCAGTTAGAG
GGTGACGTAC AGGAAGGACG TACCACGATA CCGGCGAAAA AATTTCTCGA TATTGTTAAA
TCATTACCCG ATCAGGTAGA GCTTAAAATC GAGCAACAGG AAAATCGCCT GTTACTCCGC
TCTGGTCGTA GTCGTTTTAC TCTGGCAACA CTCCCTGCCG AAGAATATCC GAATGTGGAG
GCCTTCCAGG CCGATATCGA ATTTACGATA AAGCAAGGCA CACTCAAGTC ACTCATCGAT
GCGACTCAGT TCTCGATGGC TAATCAGGAT GTCCGTTATT ATCTTAACGG TTTGTTGTTA
GAGACCGAAG GAAATGTGCT GCGTGCTATC GCTACCGATG GTCATCGCTT AGCATTGAGC
CATCGTATGG TTGAAGAATC ACTGCCTGAG AAGCAGGTGA TCGTGCCGCG TAAAGGTGTG
GTCGAGTTGC AACGCTTATT CGAAGGCGAA GATTTAGATA TCACTATCGC TATCGGCGAT
AATGCCATTC GTGCGACGAC GGGGAGTGCT GTATTCACCA GTAAGCTGGT CGATGGTCGC
TTCCCTGATT ACCGTCGTGT ATTGCCTAAA GGTGGCGATA AGATCGTTAT TGCGAGTCGT
AACCATCTTA AACAGGCGCT ATTGCGTGCT TCTATTCTTT CAAATGAAAA ATTCCGTGGC
GTACGTGTTC AGCTTGAAAA TAATCTGATA AAGATCACCG CCAATAATCC GGAGCAGGAA
GAAGCGGAAG AGATCTTAGA TGTTGAATAC GAAAACACCC CGCTTGAGAT AGGGTTTAAC
GTCAGCTATC TGCTCGATGT CCTCAACAAC TTACCTTCTG ATGATGTTCG TATCACGCTT
ATCGATGGTA ATTCGAGTGC CCTGATAGAG AACCATATAG AAGAAAATTC TATGTACGTG
GTTATGCCGA TGAGACTCTA G
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| Protein sequence | MKFSIDRDAL LKPLQLVTGA VERRHNLPIL ANLLVEVSGH SLKMTGTDLE VELVGQVQLE
GDVQEGRTTI PAKKFLDIVK SLPDQVELKI EQQENRLLLR SGRSRFTLAT LPAEEYPNVE
AFQADIEFTI KQGTLKSLID ATQFSMANQD VRYYLNGLLL ETEGNVLRAI ATDGHRLALS
HRMVEESLPE KQVIVPRKGV VELQRLFEGE DLDITIAIGD NAIRATTGSA VFTSKLVDGR
FPDYRRVLPK GGDKIVIASR NHLKQALLRA SILSNEKFRG VRVQLENNLI KITANNPEQE
EAEEILDVEY ENTPLEIGFN VSYLLDVLNN LPSDDVRITL IDGNSSALIE NHIEENSMYV
VMPMRL
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