Gene CCC13826_2335 details

Gene Information

• Locus tag: CCC13826_2335
• ID: 5595671
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter concisus 13826
• Kingdom: Bacteria
• Replicon accession: NC_009802
• Strand: +
• Start bp: 202148
• End bp: 209200
• Gene Length: 7053 bp
• Protein Length: 2350 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 640928807
• Product: putative transcriptional activator
• Protein accession: YP_001466117
• Protein GI: 157164851
• TIGRFAM ID: [TIGR01901] filamentous haemagglutinin family N-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTAAAGA ACAACCAAAT TTCAAATGCG CAAAGCAATC AAAAGCCTAG CCTTTTAACC 
ATAGGCTTAA ATTTCTACGT AAGTCTCTCT TTGCTACTTG CCACTTCACC AGCATTAGCA 
AATGAGCCAA GCATCATAGC TGACCCAGGT GCTAGCAACC GCCCTGATAT ACTAAAAGCT 
CCTAATGAGA CGCTAATAAT AAACATCACA AACCCTGATA GCAAGGGTGT ATCTATAAAT 
GAATATAGTA GGTTTAATAC CCCAACCACT GGCACTATCC TTAATAACTC TAATAAAAAC 
ATAGACACTA AGATAGCTGG CCAGATAGAT GCAAACTATA GGCTAAATAA AGAGGCAAGC 
CTTATTATAA ACAAAGTAAA TTCGGCTGAA AAATCATCTC TAAAAGGAAA TTTAGAGGTT 
GCTGGTAGCA GAGCTGATGT GGTCATAGCA AACCCAAATG GCATAAGCGT AGATGGTCTA 
AATATGATCA ACTCTCGCTC ACTTACGCTA ACAACAGGCA ATATCAATAA ACTAAGTCCT 
AAAGAGATAG AGCTAATATC TAATAACTCT ATTGACATCG TAGGGGACGG CCTAAACGAT 
AAGAGCAGCG ACTATACTAA TGTGATCTCA AATGCTGTAA ATTTAAACTC AAATATCCAC 
GCAAATGAAC TAAATATCAT CGGTGAAAAG GCGGTTGGCT CAAGTAAAGA TAGACTTTAC 
AACGACATAA AAGCTAAAAA CCAAGAAAAC AGCTTTAGCC TAGATAGTAG CGCACTTGGC 
GGCATGTATG CTAATAAAAT CAAATTAGTT GGCACAAGTA ACGGCGTAGG CGTAAATAAT 
AACGGCCTAG TGATAGCAAA TAACAACATA GAGATAAGCC TTGATGGCAA TATAGTTAAT 
GCCGGTGCTA TCGCTTCTAA CAAAGAGGCC AAGATAGAGG CAAAGACTAT AACAAACAAA 
GATGAAGCGC TAATAGCAGC CAAAGAGAAC CTTAATATAA AAGCAGACAC TTTGGTAAAT 
ACTTCAAGTC AAATTTATGC TAAAGATATA AATGTAGAGG CTAAAAAGCT AGTAAATAAC 
TCAAGCTCAC AGGCTAGGGT GGAGAAAAGC TCATTTGCTA AAAATTTAGC TCTAAAGCAA 
AGTGGCGAGA ATAGATTTAA ACTTGAAGAG GTAAATTTAA AAGAGATAAA AACAAAGATA 
GAGGCTAAAT TTAAAAAACT AGGCAAAGAG CTAAACGAAG AGGAGCTAAA TGCTGAAATT 
TTAAAAGAGG CTATAAATAA AGATAGCACC CTTTATGCTC TAAATTTACA CAAAGACTCA 
TATTTATATG GCACATCGAC AAAGGTATTT CATAATCTAA GACTAGACAT AGACAAAAAC 
GAAGTAGTAC TTGATACTAG CAAAGCAAAA GACCGCGAAG TGCTAAAGAG AATTTACTAC 
TCTATAAACA AAGAAATTTT AAACGAAGAA GATAAGGCAA ATTTCATCCC AGGTAGCATA 
GTAGCAAGCA ATGATATAAA TTTAAAAACA GATGAAGTGC TAAATGATAA GAGCTTTATC 
TATGCAGGCA ACGACCTTGT GCTTGATAGC AAAGATATAA CAAACGTAGC ACTAAATTTA 
AGAAGAGATG GCCGAAGCTT TAATGAGTTT AAATGGAAAC AACAAGAGTG GAAAAAGGGG 
ATTAAAAAAG GACTTGGTAA AAAAAGATGG GTGACTAAAG GCGGAAAAAG CACGAATTTT 
AACTTCTCAT ACACAGACGT TGGTTTGCCA GCAGTCTTTG CGGCGGGCAA TAACATAGTA 
GGAAGCACGC AGGACTTTTC AAGCTACGCA CTAAATGATG ATATAAAACT AGCAAATGTT 
GATCTGGATA AATTCTCTGA GCCAATATTT AATAGCCCAA TAATTAAAAA CCTAAATAGA 
AGAGTGAAAA ACCAAGGGTA TTACTACAGC CTTGATAGTA TAAACTCAGC TTATATAGCA 
AATATCCTTG ATGGCTTATA TGAAGCAAGA AACGAGAGCA TAAGCAAATT TAAAAATGAA 
GCAAAAGATA AAAACGTAAA AGCCTCAGCT CTAGTAATGG CTAACAACAT AGACCTAGAC 
GCCAAAGGCA ACATAAGCCT AGCTGGTAGC GTAGTGGCTG ATAATATCAA TCTAAACTCT 
CAAAATTTAA ACCTAAATCA CCTAGAGCTA AACTCTAAAG ATCTAAATTT AAAAGCAGGC 
GCAGCAAATA TCAACTCAAG TGAAATTTCA GCCAAAAATA TAAATGTAGA TGCAAATAAT 
ATAAGCTTAG ACAAAGAGTC ATCTCAGTTT AGCAAGGCTT CAAATCTAAA AGCAGACGAG 
AGCTTAAATT TAAGTGCTAA AGAAAATTTA AACATCACTG GCGGAGGCTT AGAGGCTGAC 
AAGATAAATT TAAACGCAGA TAATATAAAC ATAAACGCTA AAGAGTTTGC CTACAGCCAT 
AGCGCAAAAG AAAAAGGTGT GGAATTTAAA CAAAACATCC AAACGCTAAA TAGCGCAAAC 
CTAGACGCAA AAGATATAAA TTTAAACTCT AAGTCAAACA CGCAGATAAG CTCAAGCAAC 
CTAAGAGCTA CTAACAAGCT AAATGTAGAG GCTGGAAAAG ATATATATGT AGTTGGAGCT 
AATACAAACG AGAGTACTGA AACTAAAGAG AAGTCAAAGG GCTTTTTCTC TAAAAAAGAG 
TCTCATCTAA TGGCTATAAA TCAAAAGGTC ATCAGCTCAA ATTTAAACGC AGGTGATATC 
AGCTTAAAGG CTGGCGGTAA TGCAATAGTA ACTGGCTCAA ATTTAAGTGC TAAAAATGAT 
ATAAACATAG ATGCAAATAA TATAGGCTTA GCTCCAACAG CATATAAAAA TGATGAGGCA 
AGATCTAGCT CTAAGAAGTC ATTTGGTGGA TTAAAATCTA GCCTTGATAT GCACTCTCTT 
GATAAGACAA ACTTACAAGG CTCATCTTTA AGCACTAGTC AAGGAGATAT AAATTTAAAT 
GCAAACAACG ACATCTCTAT AATATCTTCA GATATTAAAG GTGGTAGAAA TGTAAATTTA 
AATGCTAGTA ATAACTTGTC TATATTAGCA GCCAAAGAGC AAATAAAAGA AAAAAGCGTT 
CATAAGAGCT CAAACATTAA TATCATCTCA TTATTGACAT ACCCAGGCAT GCTGGTAGCT 
TCTGCGATAG ATCCTATTGG GACTGGTTCA AATACATACT TGTTTGAGCA AATGTTTGGA 
GATACTTTAA CTCAAATTTA TCGCTCTACA TATAACGAAA AGGGAAGTCT TGATGCGCTA 
GCGAAGCTTT CAAATATATC TGCAGCCAAA GAGCTTAATC TAAAAGCAAA TGAAGCTACT 
ATAACTGCAA ATTTATCAAG TAAAGATGAT ACTAATATAA AGGCAAATTC TATTGAGATA 
TCAAATGCCG AAAACGAGCA TAGTAGCTAT GAGATATCTA AGAGCAAGGG TATAAATCTA 
CCAAGCACCA AAGATCTTGC AAATGATCAA AAACCAAAAC CTATAAAAGA ATTTAAGTAC 
GATACTAGCA CCAAAACAAG AGTAGCAGAC GCAGAGTATG AAAAATCTAC CACCGATGTA 
GCATCAACTA AAGCTATATC ATCAAACCTT GTTTCAGATA AAAATATAAA TTTAAATGCA 
AACGAAGAGA TAGGTATCAC TGGATCAAAT TTGATCGCTA AAGAAGATAT AAATCTAATA 
AGTAAAAATG CAAATATCGA TATATTAAAT AGTACCGACA CTACTGATAT ATCAAAAACA 
CTAAAACAAG CAAAAGCAGC TCTTTCTATC ACTGCCCAAA ACGAATACGT AGAGGTGGCT 
CCAGCTAGTC TTGCTTTGAT AGAAGCTATA AAGCAGCTTA AAAAGGTAAA AAAAGAGTAT 
GATAGCTATA AACACACTAG AGATGATCTA AAAGATAAAC TACATGAGCT AAAACAAGCC 
TATAAAAGTA AAACTCCTGG CATAGATGGC TCAGATATAG AAGATCTATC AGATATCCTT 
GAAAATGTTA ATGACGAAGA GAGGTACTAT AAGGCAAATA TAGCTTTAGC TATGGCAAAC 
GTAGAAGCTA AGAGCCTAGC ACTTATAGCT CAAGTAGCAG CAGCTGCAAA GGCAGCATCT 
AACTGGTATA CATTTGGTTT TAGTGTAGGA GTAGCCGCTA GTGTAAATGG TCATAAATCA 
AAATCAAACT CAAATGAAGT TATCTCTAAT CCATCAAATT TAAGCGCAAA TAACATCAAG 
ATACAAACTC CAAATGATAC AACTATCACT GGTTCAAATT TAAGCGCTAA TAATCTAATA 
GATATAAACA CAAACAACTT AAATATAAAC TCTAGCAAAA ACACCTATAC ATCAGAAAGT 
AAAGACAAAA GCATAGGTGG AACCATGAGA TATACTATGT ATGGTGGTGG CGGCGGAAGT 
GCTGGTCTAA ACTATTCTAC TAGTAGCAGT GACACAGAGA GCCTAACAAA CAACAACTCT 
CATCTTTACT CAGCTAAAGA TATGAATATA AACACAGCTA ATGACGCAAC CATCAAAGGA 
GCAAATTTAA GAGCTGATGA GAGATTAAAT TTAAAAGTAG GAAATAACCT AAGCTTAGAG 
AGTGTAAGAG ACAAATACGC ATACAACGAA AGAGGATATA GTGTAGGTGT TGGCATAGGA 
TTTAGTAGTG ATAAATCACC AAACTCAAGC TTTGCTAATC CATCTAGCAC AAAAGCAACT 
AGCACCAATG CAAATTTCTC TAGATCAAGA TCAAATACAA TAACCAAACA AACCGTACTC 
TCATCTATAA CAGCAAATGA GCTAAACGTA GAGGTAGGCA AAAACACTCA TCTAAAAGGA 
TCACTTCTAG CAGCAGGAGA GTATGATAAA GATAATACCT TTATAGATAA CCACAACCTA 
AATTTAAAGA CAAATACCCT AAGCTATGAA AACCTATCAA ATACAAGCTA TGCTAAAGGA 
ACAAACTTTA GTATAGGTGC TAACTATATA TTAGAAGATA AAAACAATAA AGATAGCAGA 
TCAAATAACA ATCAAGAAGA TAAATTTACA GGTCTTAAAT CAATAGATCT ATCTAACCAT 
AGAAATTTAA GCTACACACT ATCTAAAAAC CTAGCAACTC TAGGTAGTGG CAACATAGAG 
ATAGCTGATA AAGAGAACTC TGATGATCTA ACAAGACTAA ATAGAGATAC AACTAAACTA 
ACAAAAGATC TAGTAAATAC TAGCATAAGC TCAAATGTAG ATGCTAGCAT GGATTTAAGG 
GTGCTAACAA AGAGTGGGCA AAAGGATATC AAAGATGAGT TTAATACAGC TACTGCTATA 
ACAAAAGCAC TAAATGCCAT TATAGAAACT GGGGAGTTTA ATTTTAATAG TGAAGTAAAA 
GAAAATGTTG CACAGTATGA AGCTGGAAAA CTATTAGGCA AAGAACTTGC TCAAAAACTA 
ATAGATGATA GTGTCACCAT AGAAGAAAAG GAGGCCTTGG GAAATAAATT TATAGAGCTA 
TTTGCAAGTA TGTCAGGTCT TGACCTTAAT GGCATATCTT TAAGAATAAT TGATGATAAA 
TTCGCAAAAG GAAAAGACGA TGAAAAATTT CTAGGACATT TTAATAGTGG CTCAATAATA 
CTAAATTTAG CTCACATTAA AAATGTTGAT CAGTTTGTGA GCACTCTAGG ACATGAGTTA 
AAACATGCCA TAGACTATAA AGCTGGCAAA TTTATACCAG GAGATAGTAA GCAAGATAGA 
TATGCAAAAC TAAAAGAAGA TAGTTTTAGT GACTATCTAA GCAAAGCTCT AAATTTACAA 
GATAGTGGCA TCAATGCCAA AGATGCAGCG ATAAACTATA TTAAAAATCA AAGTAGCTTA 
AATACTCTAC TCTTAAATTC TTATATGTTT AATGGACTAG ATAAGAGTAA GGGGGATAAT 
AGACAATTTA GTCAGCCAGA AATAGACTGG CTAAAGGCTA ATGGCAATAA TTTTGCTAAC 
TTCATTAGAG AGAGAACAGG TATAGATATT TCTCAAGATG AAGCCATTTC AAGACTTTCA 
GTGCAGGCAC TAAAGCAAAG TGATAATGTT TGGTCTTTGA TGTTTAATAA AGATGATGCC 
TTAGCAAAAG AGTTTTTGAC AAAATCTGAC AACAAAGATG GTCTATTTGT TGTTGATAAA 
TTTGATAATA GAAATAATAG ATTAAATTTA GGTGTGGCCA TTAATAATAT AGATTTTTAC 
AATAAATATA TTCATCCAAA CATAGACTCT TTACCGCTAG AAACAGTTAA AAATAGTATA 
TTAAACTTGG CATCTAATGC AGATAAAATA CCAAGCAACT TGCAAAACTG GTATAAAGAT 
CAGACTTTTA CCGCCTCTAG CTTGCGTGAC GGTGCTGTAT CTTTGGCAAA AGATATAGCC 
GTAAACGGAG TAAGTGGCGT AAGAAATATG TACTATAATA TATTTAACAA CGATAAAAAG 
ATTTTAGAAA AAGTTTATGA CTATAATGGC ATAAGCGATG ATATAGCATT AATATCAGGA 
TTTGATACAT CTAGTTTGAC TGGTGTAGCA GCAATAGGCA AAGGAGCGGG CGTTGGTCTT 
GGAAAAGGTG CTGTATATGT AGCTAATAGC CTAAAAGCTC CATTTGTAGA GATGGAAAAG 
AGAGTGGCTG CAAAAGTAGC AGCCAACACC CCAAAAGGTG GAACATTAGG TAGTGATGGT 
ATACTAAGGC ACAATGGCAA AGAGTATGTA GCTCGCAGTC TTGATCTATC AGGAAATAAA 
GTGATATATG AACAAGTAAT AAACAAAAAA GGCACTGGAA ATTTTAAAAC TACCAACGAT 
AAAGGTTACT TCATAACAGC CAGTAAGCCA AAACAAATAA CTGAAGGTGT CAGTTATCAG 
TTTGGAAATT TTATTTATGA TCCAAAGACT TGGGCGTACG GTGTTGCTTT AGAAGAGATA 
GTTAATGGGT ATCTATCTCC AGAGCCACCA ACGAATGGAT TTCAAGCAAT TGGCGGTGGC 
ATATATAAAT TTATAGAAAT GCACAACAAA TGA 

 

Protein sequence

MLKNNQISNA QSNQKPSLLT IGLNFYVSLS LLLATSPALA NEPSIIADPG ASNRPDILKA 
PNETLIINIT NPDSKGVSIN EYSRFNTPTT GTILNNSNKN IDTKIAGQID ANYRLNKEAS 
LIINKVNSAE KSSLKGNLEV AGSRADVVIA NPNGISVDGL NMINSRSLTL TTGNINKLSP 
KEIELISNNS IDIVGDGLND KSSDYTNVIS NAVNLNSNIH ANELNIIGEK AVGSSKDRLY 
NDIKAKNQEN SFSLDSSALG GMYANKIKLV GTSNGVGVNN NGLVIANNNI EISLDGNIVN 
AGAIASNKEA KIEAKTITNK DEALIAAKEN LNIKADTLVN TSSQIYAKDI NVEAKKLVNN 
SSSQARVEKS SFAKNLALKQ SGENRFKLEE VNLKEIKTKI EAKFKKLGKE LNEEELNAEI 
LKEAINKDST LYALNLHKDS YLYGTSTKVF HNLRLDIDKN EVVLDTSKAK DREVLKRIYY 
SINKEILNEE DKANFIPGSI VASNDINLKT DEVLNDKSFI YAGNDLVLDS KDITNVALNL 
RRDGRSFNEF KWKQQEWKKG IKKGLGKKRW VTKGGKSTNF NFSYTDVGLP AVFAAGNNIV 
GSTQDFSSYA LNDDIKLANV DLDKFSEPIF NSPIIKNLNR RVKNQGYYYS LDSINSAYIA 
NILDGLYEAR NESISKFKNE AKDKNVKASA LVMANNIDLD AKGNISLAGS VVADNINLNS 
QNLNLNHLEL NSKDLNLKAG AANINSSEIS AKNINVDANN ISLDKESSQF SKASNLKADE 
SLNLSAKENL NITGGGLEAD KINLNADNIN INAKEFAYSH SAKEKGVEFK QNIQTLNSAN 
LDAKDINLNS KSNTQISSSN LRATNKLNVE AGKDIYVVGA NTNESTETKE KSKGFFSKKE 
SHLMAINQKV ISSNLNAGDI SLKAGGNAIV TGSNLSAKND INIDANNIGL APTAYKNDEA 
RSSSKKSFGG LKSSLDMHSL DKTNLQGSSL STSQGDINLN ANNDISIISS DIKGGRNVNL 
NASNNLSILA AKEQIKEKSV HKSSNINIIS LLTYPGMLVA SAIDPIGTGS NTYLFEQMFG 
DTLTQIYRST YNEKGSLDAL AKLSNISAAK ELNLKANEAT ITANLSSKDD TNIKANSIEI 
SNAENEHSSY EISKSKGINL PSTKDLANDQ KPKPIKEFKY DTSTKTRVAD AEYEKSTTDV 
ASTKAISSNL VSDKNINLNA NEEIGITGSN LIAKEDINLI SKNANIDILN STDTTDISKT 
LKQAKAALSI TAQNEYVEVA PASLALIEAI KQLKKVKKEY DSYKHTRDDL KDKLHELKQA 
YKSKTPGIDG SDIEDLSDIL ENVNDEERYY KANIALAMAN VEAKSLALIA QVAAAAKAAS 
NWYTFGFSVG VAASVNGHKS KSNSNEVISN PSNLSANNIK IQTPNDTTIT GSNLSANNLI 
DINTNNLNIN SSKNTYTSES KDKSIGGTMR YTMYGGGGGS AGLNYSTSSS DTESLTNNNS 
HLYSAKDMNI NTANDATIKG ANLRADERLN LKVGNNLSLE SVRDKYAYNE RGYSVGVGIG 
FSSDKSPNSS FANPSSTKAT STNANFSRSR SNTITKQTVL SSITANELNV EVGKNTHLKG 
SLLAAGEYDK DNTFIDNHNL NLKTNTLSYE NLSNTSYAKG TNFSIGANYI LEDKNNKDSR 
SNNNQEDKFT GLKSIDLSNH RNLSYTLSKN LATLGSGNIE IADKENSDDL TRLNRDTTKL 
TKDLVNTSIS SNVDASMDLR VLTKSGQKDI KDEFNTATAI TKALNAIIET GEFNFNSEVK 
ENVAQYEAGK LLGKELAQKL IDDSVTIEEK EALGNKFIEL FASMSGLDLN GISLRIIDDK 
FAKGKDDEKF LGHFNSGSII LNLAHIKNVD QFVSTLGHEL KHAIDYKAGK FIPGDSKQDR 
YAKLKEDSFS DYLSKALNLQ DSGINAKDAA INYIKNQSSL NTLLLNSYMF NGLDKSKGDN 
RQFSQPEIDW LKANGNNFAN FIRERTGIDI SQDEAISRLS VQALKQSDNV WSLMFNKDDA 
LAKEFLTKSD NKDGLFVVDK FDNRNNRLNL GVAINNIDFY NKYIHPNIDS LPLETVKNSI 
LNLASNADKI PSNLQNWYKD QTFTASSLRD GAVSLAKDIA VNGVSGVRNM YYNIFNNDKK 
ILEKVYDYNG ISDDIALISG FDTSSLTGVA AIGKGAGVGL GKGAVYVANS LKAPFVEMEK 
RVAAKVAANT PKGGTLGSDG ILRHNGKEYV ARSLDLSGNK VIYEQVINKK GTGNFKTTND 
KGYFITASKP KQITEGVSYQ FGNFIYDPKT WAYGVALEEI VNGYLSPEPP TNGFQAIGGG 
IYKFIEMHNK