| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_2296 |
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| Symbol | topA |
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| ID | 5597276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | - |
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| Start bp | 1806096 |
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| End bp | 1808210 |
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| Gene Length | 2115 bp |
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| Protein Length | 704 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640930349 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_001467625 |
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| Protein GI | 157164552 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA
[COG0551] Zn-finger domain associated with topoisomerase type I |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGCT TAATCATCGT GGAATCTCCC GCAAAAGCAA AGACTATCAA GAATTTCCTA
GACAAAAGTT ACAACGTCAT CGCCTCAAAA GGCCACATCA GAGACCTGCC AAAAACGAGC
TTTGGCATCA AGATAGAGGA TGATAAATTT ACCCCAGAGT ATCGCATCAG CAGCGATCAC
TCCGCCATCG TAAAAGAGAT AAAAGAGCTT GCTAAGGGGG CTGATGAAAT TTACCTCGCG
ACCGATGAGG ATAGAGAGGG TGAGGCGATC GCGTTTCACA TCGCAAATGC CATCGGCAAA
GAGCCAACCA GCCTGCCTCG CATCGTCTTT CACGAGATCA CCAAAAGCGC CATACAAAAC
GCTCTAAAAA GCCCAAGACA CGTCGATATG AACAGCGTCA ATGCCCAGCA AACAAGGCGC
TTACTCGACC GCATAGTTGG CTACAAGCTA AGCCCGCTTT TAAATTTAAA GATACAAAAA
GGCTTAAGCG CTGGACGTGT GCAAAGTGCA GCGCTAAAGA TAATAGTCGA TAGAGAGCGT
GAAATTCAGG CGTTTAAACC GGTTGAATAC TACACCATTG ACACCGTTTT TAAAAAAGAC
CTAGACGCCG AGCTAGTTAA ATTTGAAAAC CAAAAGATCG AAAAGCTAAC CATCCAAAAC
CCAGACCGCG CAAAATACAT CATTGAAAAT TTACAAAATG AGAAATTTAG CGTCCGCGAG
ATCGAGAGCA AGGATAGAAA GATCCAGCCA AGCCCGCCAT TTATGACTTC AACACTTCAG
CAAAGTGCAA GCAACCGCCT TGGCTTTAGT CCTAAAAAGA CGATGATGAT CGCGCAAAGC
CTCTATGAGG GCGTGCAAAC AAACGAGGGC TTCATGGGTG CGATCACTTA CATGAGAACA
GATAGCTTAA ATTTAGCCAA AGAGGCCGTC GCAGCCGCTA GAGAGCACAT CTTACAAAAC
TACGGCAAAG AGTATCTGCC AGCCAAAGCG ATAAGCTACA CGACAAGCTC AAAAGGTGCG
CAAGAAGCCC ACGAAGCGAT CCGCCCTACA AATTTAAACT TCACACCGCA AATCGCCGCT
AAATTTTTAG AAAAAGATGC ACTCAAACTC TACACGCTCA TCTACAATAG ATTTTTGGCC
TGCCAAATGA GCGCATGTGT GAGCCAAACG CAAAACGTCT ATGTCGCAAG CGAAAAAGGC
GAGTTTAAGA TAAGTGGTAG AAAGGTGCTA TTTGACGGCT TTTACAAGGT TTATGGCGAG
CTTGATAAGG ATAAAATTTT GCCAAATTTA AAAAAGGGCG ACGAGATGAG TTTGCAAAGC
ATAAAAAGCA CGCAAAACTT CACCGAGCCA CCAGCCAGGT ACTCAGAAGC TGGCCTTGTT
AAAAAGCTAG AGAGCCTTGG CATCGGCCGC CCAAGTACCT ACGCACCGAC CATCTCGCTA
CTAACATCAA GAGACTACGT GAGGATCGAG AAAAAGCAGC TCATACCAAA CGAGATCGCA
TTTAGCATGA TAGGCGTTTT GGAGGAACAC TTTAGCAACA TCGTCGATAG CGAATTTACC
TCACATCTTG AAGAAAAGCT CGATGAGATC GCACTTGACA AGGCTGACTG GCAAAAGGTG
CTAAGCGACT TTTACTATCC ATTTATGGAA AAAATTAGCG CTGGCAAAAC TGGCATAAAA
AGCCTAAAAA CAGCAACTCC GATCGGCGAG AAATGCCCAG AGTGTGGAAG CGAGCTAGTG
CTTAGAAAGG GCAGATATGG CGAGTTTATC GCTTGCTCAA ATTTCCCAAA ATGCAAATAC
TCAAGAAACG TCGCAAAAGA TAATGAAAAG AGCGCAGAAA CTGGCTCTAC AACGGCTGCT
AAGCCAAAAC GCGAGCTTAA AAAGCTTGAC GTGCCATGTC CAAAATGTGG CGGCGAGATC
GTCGAGAGAT TTAGCAGGCG CGGTAAATTT TATGGATGTG CCAACTATCC AAAATGCGAC
TTCATCTCAA ACTACGAGCC AGTCGCGCAA AAATGCGATG AGTGCGGCGG CGATATGATC
AAAAAAGAGC TTAAAAAAGG CACATTTATA GAGTGCACAA AGTGCAAGAA AAAGACGTTA
GTTTCTGAAA ACTAA
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| Protein sequence | MKSLIIVESP AKAKTIKNFL DKSYNVIASK GHIRDLPKTS FGIKIEDDKF TPEYRISSDH
SAIVKEIKEL AKGADEIYLA TDEDREGEAI AFHIANAIGK EPTSLPRIVF HEITKSAIQN
ALKSPRHVDM NSVNAQQTRR LLDRIVGYKL SPLLNLKIQK GLSAGRVQSA ALKIIVDRER
EIQAFKPVEY YTIDTVFKKD LDAELVKFEN QKIEKLTIQN PDRAKYIIEN LQNEKFSVRE
IESKDRKIQP SPPFMTSTLQ QSASNRLGFS PKKTMMIAQS LYEGVQTNEG FMGAITYMRT
DSLNLAKEAV AAAREHILQN YGKEYLPAKA ISYTTSSKGA QEAHEAIRPT NLNFTPQIAA
KFLEKDALKL YTLIYNRFLA CQMSACVSQT QNVYVASEKG EFKISGRKVL FDGFYKVYGE
LDKDKILPNL KKGDEMSLQS IKSTQNFTEP PARYSEAGLV KKLESLGIGR PSTYAPTISL
LTSRDYVRIE KKQLIPNEIA FSMIGVLEEH FSNIVDSEFT SHLEEKLDEI ALDKADWQKV
LSDFYYPFME KISAGKTGIK SLKTATPIGE KCPECGSELV LRKGRYGEFI ACSNFPKCKY
SRNVAKDNEK SAETGSTTAA KPKRELKKLD VPCPKCGGEI VERFSRRGKF YGCANYPKCD
FISNYEPVAQ KCDECGGDMI KKELKKGTFI ECTKCKKKTL VSEN
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