Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_1970 |
Symbol | |
ID | 5596425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | - |
Start bp | 1345172 |
End bp | 1346521 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640929909 |
Product | hypothetical protein |
Protein accession | YP_001467190 |
Protein GI | 157164392 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.310408 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTGTTAA GGATTAAGCA AACGCTTGCA AACATCCCGA TAACCGCGCG CGTAACGCTT TGGTACTCGT TTTTTATCAT CGTTATCGTG GCGGCTTTAG TTGCTATCTC GGCGGTCGTG GCGGATGAGG TTTTTGAGGA CGTTAGCCAA AAAAAGCTGG CCAAGTCAGT CACCAAAATA GCCAACGATA TGGATGAGTT TGAGCCATAC GATGATGGGA TATTTTTTAT AAAATATAAC GCGAAAGGCG ATGTGATCGG CGGTCTAGCG CCAAAGCGCT TTCAAATTTC ACTTAAAATG AATAGCGGTG CGATCCGTCT TTATGAAGAG GGCGAAAACC GCTTTTACTA CTACGATATC GCAGCTAAAG GCAAAAATGT CTGGGTCAGA GGCGTGATAA ATGCGGAGAA ATTTTTTAAA AAAGAGGGGC TATTTTTACT GGCTCTTGGC GTTTTTGTGC CGGTTTTGTT TATTTTTGTG CTTTACGGTG GCTATAAAAC GATAAAAAAT GCGATGAAGC CAGTCGCTAC GATGTCAAAA ACTGCGCTTG AGATAGGCAG TAGCCAGGAC TTTTCAAAGC GCATAGACCT GCCTGCTGGC AAAGACGAGC TGCACGCGCT TGCAAGTGTT TTTAACCAGA TGCTAGACTC CCTAGAAAAG GTCTATCAAA GCGAAAAACA GCTCACATCA GATGTCTCGC ACGAGCTGCG AACGCCGCTA TCTGTCATCA TGGCTGAGAG CGACTACGCT AAAAATTACT CGCAAAATTT GGACGAGGCC AAGGAGTCGC TGGAGGTCAT CTCTAGGCAG TCAAGAAAGA TAACCTCGCT GATAGATCAA ATTTTAGAGC TCTCAAGGCT CGAAGCTGGC AGAAATTTGG AGCTAAAAGA TATAAATTTA AGCTCTATCT TGCAAAATTT AGCCAGCGAC TATGAAAAGC TAGCAAGCGC TAAGGGGCTA AAATTTAGCT GCGTTGTAGC GCCAGATGTC CAAATTTTAG GCAATGAGCT TATGATATCA AGGCTGGTGG ATAACTTTTT AAGCAACGCA CTAAAATTTG CCTCAAGTAA AGTTGAGCTA AATTTAACCC TCACAAAAAC GCACGCACTT TTGTCTGTAA AAGATGATGG CTTAGGCATC TCTAAAAAAG ATATCGAGCT AATCTGGAAT AAATTTTATC AAGTTGAAAG CTCAAGAAAT AAGAGCCAAA ACAGAGGCAG CGGTCTTGGT CTTGCCATCG CTGCAAATAT AGCTAAAATT CACGGCGCAA AGCTTGGTGT AAAAAGCGAA GCAGGAGCTG GAAGCGAATT TTGGACAGAA TTTGAGCTTG TAAATTTAAA GCAAGTGTAA
|
Protein sequence | MLLRIKQTLA NIPITARVTL WYSFFIIVIV AALVAISAVV ADEVFEDVSQ KKLAKSVTKI ANDMDEFEPY DDGIFFIKYN AKGDVIGGLA PKRFQISLKM NSGAIRLYEE GENRFYYYDI AAKGKNVWVR GVINAEKFFK KEGLFLLALG VFVPVLFIFV LYGGYKTIKN AMKPVATMSK TALEIGSSQD FSKRIDLPAG KDELHALASV FNQMLDSLEK VYQSEKQLTS DVSHELRTPL SVIMAESDYA KNYSQNLDEA KESLEVISRQ SRKITSLIDQ ILELSRLEAG RNLELKDINL SSILQNLASD YEKLASAKGL KFSCVVAPDV QILGNELMIS RLVDNFLSNA LKFASSKVEL NLTLTKTHAL LSVKDDGLGI SKKDIELIWN KFYQVESSRN KSQNRGSGLG LAIAANIAKI HGAKLGVKSE AGAGSEFWTE FELVNLKQV
|
| |