| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1933 |
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| Symbol | nifJ |
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| ID | 5596576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | - |
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| Start bp | 232366 |
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| End bp | 235944 |
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| Gene Length | 3579 bp |
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| Protein Length | 1192 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640928837 |
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| Product | pyruvate:ferredoxin (flavodoxin) oxidoreductase |
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| Protein accession | YP_001466147 |
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| Protein GI | 157164373 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
[COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit
[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
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| TIGRFAM ID | [TIGR02176] pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.135787 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAAAA TAATGAAAAC TATGGACGGA AACGAGGCCG CAGCTTACGC GTCATACGCA
TTTACCGAAG TAGCTGGAAT TTACCCTATC ACTCCTAGCT CGCCTATGGC TGACTATACT
GACCTTTGGG CAGCGCAGGG CAAGAAAAAT TTATTTGGTA TGCCAGTAAA AGTAGTCGAA
ATGCAAAGCG AGGGCGGTGC AGCTGGCACG GTGCATGGCT CGCTACAAGT TGGCGCGCTA
ACTACGACCT ACACAGCTTC TCAAGGCCTA CTTTTAAAAA TTCCAAATAT GTATAAGATA
GCAGGTCAGC TCCTCCCTGG TGTCATCCAT GTCTCAGCTC GCTCTCTGGC GGCACAGGCT
CTTTCAATAT TTGGCGACCA CCAAGATATC TACGCCTGTC GCCAAACTGG CTTTGCTATG
CTAGCAAGCG GCTCGGTGCA AGAGGTGATG GACATCGCTG GCGTGGCGCA TTTAGCGGCG
ATTAAGGGCA GAGTGCCATT TTTACACTTC TTTGATGGCT TTAGAACGAG CCATGAAATT
CAAAAAGTAG AAGTGATGGA CTACGCGCAC TTTGATAGAC TTCTTGACCG CGAAGCATTG
CAGAAATTTA GAGACGAAGC GCTAAATCCA GAGAGCCCAA AAACAAGAGG CACAGCGCAA
AATGACGATA TCTACTTTCA AACAAGAGAG CTAAGCAACC GCTTTTATAA CGCAGTGCCA
GATATCGTAG CAGAGTATCT AGCTGAAATT TCAAAGATCA CTGGCCGCGA CTACAAGCCG
TTTAACTACT ACGGCAACCC AGAAGCGACG CGCGTCATCG TAGCTATGGG CTCAGTGACG
CAAACTCTTG AAGAGGTCGT TGATTATCTA AACGCAAAAG GCGAAAAGGT GGGCATCATC
AAGGTGCATT TGTACCGCCC ATTTAGCACG AAGTATCTCT TTGACGTGAT GCCAAAGAGC
GTGAAAAAAA TAGCCGTTCT TGACCGCACA AAAGAGCCTG GCAGCCTTGG CGAGCCACTA
TATCTTGATA TAAAAGCTGC ATTTTACGGC CAAAAAGACG CTCCAGTTAT CGTTGGCGGC
AGATACGGCC TAAGCTCAAA GGATGTCGAT CCTGCGCAAA TGCTAGCTGT GTTTGAAAAT
TTAAACCAAA GCGAGCCAAA AGACGGCTTT ACGGTGGGTA TCGTTGATGA CGTCACTTTT
ACCTCGCTAC CAACTGGAGA GAAAATTTCA CTAAGCGATG AGAGCGTTAA AGAGTGCTTA
TTTTACGGCC TTGGCGCTGA TGGCACCGTG GGCGCAAACA AAAACTCTAT AAAGATCATC
GGCGATAAGA CTGATCTTTA CGCACAGGCA TATTTTGCCT ACGATAGTAA AAAATCAGGC
GGTTACACGC GCTCGCACCT TCGCTTTGGC AAAAAGCCGA TCCGCTCGAC CTATCTCGTC
TCAAACCCGC ACTTTGTAGC CTGCTCAGTC GCAGCATATC TTGAAATTTA TGACGTGATT
GACGGCATTA GAGAAAACGG CACATTTTTA TTAAACTCTA TCTGGGACGC AGAGCAGACC
ATAGCGAAGC TACCAAATAA AGTTAAGAAA ATTTTAGCTA GCAAAAATAT AAATTTCTAC
ATCATAAACG CAACAAAGCT AGCACACGAC ATCGGCCTTA AAAACCGCAC AAACACCATA
ATGCAGTCGG CATTTTTCAA GCTTGCTGAC ATCATACCAT TTGAAGATGC GCAAAAATAT
ATGAAAGAGT ACGCGCACAA AGCCTACGCT AAAAAAGGCG AGGCGATCGT GCAGATGAAC
TACAACGCTA TCGACGTTGG CGCAAATGGA CTCATAAAAG TACCAGTCGA TCCTGCGTGG
GCAAATTTAA TAGACGATGA ACAAAAAGAT GAAAAATACA TCGGCAACAG CTTCATCGAA
AACGTTGTAA AACCGATAAA TGCGGCCAGA GGTGATAGCC TACCAGTCTC AACCTTCATA
GGCTACGAGG ACGGCCACTT TGAAGCTGGC ACGACGGCTT ACGAGAAACG CGGCGTTGGC
GTCATGGTGC CAAAATGGAT CGAGCAAAAC TGCATCCAGT GCAACCAGTG CGCATTTGTC
TGCCCGCACG CTGTAATCAG GCCATTTTTG ATAGACGAAA ACGAGCTTAG CGCAGCCCCA
CAAGGCGTAA AAGAGCACAA TCTAGAGGCA AAAGGCAAAG AGCTCAAGGG ACTAAAATAC
AAGATCCAAG TAAGCCCGCT AGACTGCACC GGATGCGAGC TGTGCGCGCA AAACTGCCCA
AGTAAAGAAA AATCGCTCGT AATGGTGCCG CTTGAAGAAG AGCTAGGCAA AAACGAGCAA
GAAAATGCTG ATTATCTATT TAAAAAGGTC GCTTATAAAG ACGATCTCAT GAACAAAGAG
AGCGTTAAAG GCGTTGGCTT TGCTAAGCCG CTCTTTGAAT TCCACGGCGC TTGCCCAGGA
TGTGGCGAAA CTCCGTATAT CACGCTTATT ACAAGGCTTT TTGGCGAGCG TATGATCGTG
GCAAACGCGA CTGGTTGTAG CTCGATATAT GGCGGCTCAG CCCCATCTAC TCCGTACACC
ACAAATGACG AAGGCAAGGG CGTTGCGTGG GCAAATTCGC TATTTGAAGA TAACGCTGAG
TTTGGCATGG GTATGAACGT AGCGATCGAG ACTATGCGCC ACCGCATCGA AGATATAATG
AGAAACAACA TAGATAGCGT GCCAAACGCA CTTTCAGCGC TTTACAACGA CTGGATAAAT
TTCAAAAATG ACGGCGAAAA AACGCAAGAG ATCACGAAAA ATTTATTGCC TATTTTAGAG
CAAAATTTAA GCGCGCTAGG CGTGAAAGAA ATTTTAGAGC TTAAGAAATT TCTCGTCAAA
AAGTCGCAAT GGATCATCGG CGGCGACGGC TGGGCGTATG ACATCGGCTT TGGCGGACTT
GACCACGTGC TAGCAAGCGG TGAGAACGTA AATGTGCTAG TGCTTGACAC CGAGGTTTAT
TCAAATACTG GTGGCCAAAG CTCTAAATCA AGCCGCGCAG GCTCGATAGC GCAGTTTACG
GCTAGCGGCA AGCCGGCTCA GAAAAAGGAC CTTGGCTACA TCGCGATGAC TTACGGCAAC
ATTTTCGTAG CACAGATCAA CTCAAACGCA AGCCAAGCAA ACGTGATAAA AGCGATCGCA
GCAGCCGAAG CCTATGACGG CCCAAGCCTC ATCATCGCCT ACTCTCCGTG CATCGCTCAC
GGCATCAAAG GCGGCTTGTC GCAGTCTGGT GGCCAAGGCG AACTCGCTAC AAAATGCGGA
TACTGGCCGA CATATCTATA CGATCCGCGC CTTTTAAAAG AGGGGCAAAA TCCGCTCAAA
ATCACTTCAA AAGAGCCTGA CTGGTCGCTT TATGAAGAGT TTTTGCTAAA CGAGGTTCGC
TACAACTCGC TTAAAAAGAC CAACCCTGAG CACGCAGACG AGCTACTAGC TAAAAATAAG
GCCGATGCGC AAAGACGCTA CCGCCAGCTA AAACGCCTAA GCCTAGCCGA CTTTAGCGAC
GAGATAGAGA ACAGCGAAGC TGCGCAAAGC GCTGAATAA
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| Protein sequence | MSKIMKTMDG NEAAAYASYA FTEVAGIYPI TPSSPMADYT DLWAAQGKKN LFGMPVKVVE
MQSEGGAAGT VHGSLQVGAL TTTYTASQGL LLKIPNMYKI AGQLLPGVIH VSARSLAAQA
LSIFGDHQDI YACRQTGFAM LASGSVQEVM DIAGVAHLAA IKGRVPFLHF FDGFRTSHEI
QKVEVMDYAH FDRLLDREAL QKFRDEALNP ESPKTRGTAQ NDDIYFQTRE LSNRFYNAVP
DIVAEYLAEI SKITGRDYKP FNYYGNPEAT RVIVAMGSVT QTLEEVVDYL NAKGEKVGII
KVHLYRPFST KYLFDVMPKS VKKIAVLDRT KEPGSLGEPL YLDIKAAFYG QKDAPVIVGG
RYGLSSKDVD PAQMLAVFEN LNQSEPKDGF TVGIVDDVTF TSLPTGEKIS LSDESVKECL
FYGLGADGTV GANKNSIKII GDKTDLYAQA YFAYDSKKSG GYTRSHLRFG KKPIRSTYLV
SNPHFVACSV AAYLEIYDVI DGIRENGTFL LNSIWDAEQT IAKLPNKVKK ILASKNINFY
IINATKLAHD IGLKNRTNTI MQSAFFKLAD IIPFEDAQKY MKEYAHKAYA KKGEAIVQMN
YNAIDVGANG LIKVPVDPAW ANLIDDEQKD EKYIGNSFIE NVVKPINAAR GDSLPVSTFI
GYEDGHFEAG TTAYEKRGVG VMVPKWIEQN CIQCNQCAFV CPHAVIRPFL IDENELSAAP
QGVKEHNLEA KGKELKGLKY KIQVSPLDCT GCELCAQNCP SKEKSLVMVP LEEELGKNEQ
ENADYLFKKV AYKDDLMNKE SVKGVGFAKP LFEFHGACPG CGETPYITLI TRLFGERMIV
ANATGCSSIY GGSAPSTPYT TNDEGKGVAW ANSLFEDNAE FGMGMNVAIE TMRHRIEDIM
RNNIDSVPNA LSALYNDWIN FKNDGEKTQE ITKNLLPILE QNLSALGVKE ILELKKFLVK
KSQWIIGGDG WAYDIGFGGL DHVLASGENV NVLVLDTEVY SNTGGQSSKS SRAGSIAQFT
ASGKPAQKKD LGYIAMTYGN IFVAQINSNA SQANVIKAIA AAEAYDGPSL IIAYSPCIAH
GIKGGLSQSG GQGELATKCG YWPTYLYDPR LLKEGQNPLK ITSKEPDWSL YEEFLLNEVR
YNSLKKTNPE HADELLAKNK ADAQRRYRQL KRLSLADFSD EIENSEAAQS AE
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