Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_1926 |
Symbol | |
ID | 5596177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | - |
Start bp | 240394 |
End bp | 241146 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640928844 |
Product | solute-binding family 1 protein |
Protein accession | YP_001466154 |
Protein GI | 157164888 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTA CAAATTTATT AAAAGTAGTA GCAGTGCTTG CAATGGCTCT AAATTTGCAA GCAAAAACTA TAAAAGATGG CGTGCTAACA GTAGCAACAG AAGGCAATTA CGCTCCTTTT ACATTTTATA ATGACAAAAA TGAGTTAGTG GGATACGACG TAGATATCGC AAGAGTAGTA GCACAAAAGC TAAATTTAAA AGTTGAGTTT TTAACAGCTC CATGGGATGC GATGCTTGCG GCATTTGACG CTGGTAAAGC AGACGTTGTT TTTAATCAAG TTAGTATAAC TGATGAGAGA AAGAAAAAAT ATGCTTTTTC AGTGCCTTAT ACTGTGACAT TTGGCGCTAT CATTACTAGA AAAGATAATA ACGATATAAA AAGTTTTGCT GATCTAAAAG GCAAAAAAGA TGCCGACTCA GCGACTAGTA ACTGGGCGAA AGTCGCTGTA AAGTACGGTG CTGAACACGT CGTAACAGAT AGTTTTGCTA AAAGCATGGA GCTTCTTATA TCAAGACGTG TAGATGCTGT TGTAAGAGAT AACATCGTAT TTTACGACTT TATAAAAGAG CGTCCAAACG CACCTGTGAA GATAGCTGCC TCACTTGATG AGAAAGACTA CACAGCAGCA GCTGTTAAGA AAGACAACGC CGAACTTGCA GAGCAAATTT CAAATGCACT AAACGAACTT TCAAAAGAAG GAAAACTAGA AGCCATCTCA AAAAGCTACT TTGGCAAAGA CGTCTCAAAA TAA
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Protein sequence | MKFTNLLKVV AVLAMALNLQ AKTIKDGVLT VATEGNYAPF TFYNDKNELV GYDVDIARVV AQKLNLKVEF LTAPWDAMLA AFDAGKADVV FNQVSITDER KKKYAFSVPY TVTFGAIITR KDNNDIKSFA DLKGKKDADS ATSNWAKVAV KYGAEHVVTD SFAKSMELLI SRRVDAVVRD NIVFYDFIKE RPNAPVKIAA SLDEKDYTAA AVKKDNAELA EQISNALNEL SKEGKLEAIS KSYFGKDVSK
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