Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_1892 |
Symbol | |
ID | 5597106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | - |
Start bp | 2012286 |
End bp | 2013431 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640930553 |
Product | ribosomal RNA large subunit methyltransferase N |
Protein accession | YP_001467818 |
Protein GI | 157164532 |
COG category | [R] General function prediction only |
COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAAAAATT TGCTTGATCT TAGCATCGAA GAGTTAAAAG AGCTTGTCTC TCCCTCGTTC AGAGCGACGC AAATTTATGA GTGGGTATAT AAAAAAAATG CGACAGAATT TAGTCAAATG CTAAATTTAC CAAAGGATAT GCGTCAGGAT CTGGCCGAGA AATTTTACCT CGATCCTCTA AAATGTGTGA AATTTGAGCA AAGTAGCGAC GGCTCTATCA AGTATCTTTT TGAACTAAAA GATGGGCTGA AAATAGAGAG TGTTTTGCTA CCGATGAAAG AGGAGATTAG CGACGAAGAT GGCAAGATCA GTCGCCATGC TCGTTACACT ATTTGTGTTA GTTCGCAGGT TGGCTGCAAA ATGGGCTGTG CTTTTTGCTT AACAGCAAAG GGTGGGCTTG TTAGAAATTT GACTGCTGGC GAGATCGTAG GGCAAATTTT GTGGATAAAA AGAGAAAATA AGATACCATA CGAGAGGCGC ATAAATGTTG TTTATATGGG TATGGGCGAA CCGCTTGATA ACCTTACTAA CGTTAGTAAA GCGATCAAAA TTTTAGCTCT TAATGAGGGT CTAGCCATAT CGCCACGTCG CCAAACCGTT TCAACTAGCG GCCTTGGCAG CCAGATAAAA AAGCTTGGCG AGATGGACCT TGGTGTCTTG CTTGCTATAT CACTGCATGC TGTTACTAAC GAGCTTAGAA GCCGCCTGAT GCCGATAAAT AAGGCGTATA ATATCGAGGC TGTTATGGAT GCTGTTAGGG GATTTCCTAT CGATATGCGA AAGCGTGTGA TGTTTGAATA TCTTGTTATC AAAGACTTAA ACGACAGCGT TAGTGATGCG AAAAAGCTGG TTAAACTGCT GCATGGTATC AAGGCAAAGG TAAATTTGAT CTACTTTAAC CCGCATGAAG GTAGTGAATT TGGACGGCCT GAGCTTGCTA GCATGCTAAA ATTTCAAGAA TATCTAAGAG ATCATGGCGT CACTTGTACG ATCAGACAGA GCAAAGGTCT TGATATAAGC GCTGCTTGCG GACAGCTAAA ACAGCGAAAT GAAAACCCAA AATTCAGAGC TAACGTTAGC GGTAATAGTG CAGCTAAAAC AGAAGAAAAA CCAACTAACG ATAAAACTAA CGTGAGTAAA AAATGA
|
Protein sequence | MKNLLDLSIE ELKELVSPSF RATQIYEWVY KKNATEFSQM LNLPKDMRQD LAEKFYLDPL KCVKFEQSSD GSIKYLFELK DGLKIESVLL PMKEEISDED GKISRHARYT ICVSSQVGCK MGCAFCLTAK GGLVRNLTAG EIVGQILWIK RENKIPYERR INVVYMGMGE PLDNLTNVSK AIKILALNEG LAISPRRQTV STSGLGSQIK KLGEMDLGVL LAISLHAVTN ELRSRLMPIN KAYNIEAVMD AVRGFPIDMR KRVMFEYLVI KDLNDSVSDA KKLVKLLHGI KAKVNLIYFN PHEGSEFGRP ELASMLKFQE YLRDHGVTCT IRQSKGLDIS AACGQLKQRN ENPKFRANVS GNSAAKTEEK PTNDKTNVSK K
|
| |