Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_1848 |
Symbol | |
ID | 5596977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | + |
Start bp | 5474 |
End bp | 6709 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640928606 |
Product | hypothetical protein |
Protein accession | YP_001465930 |
Protein GI | 157164264 |
COG category | [R] General function prediction only |
COG ID | [COG1896] Predicted hydrolases of HD superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAGTG CTAAGCTTAT AGAACATATC TTTAAAGCAG CATCTATATC ACGTTGGAAC GACTATCCAA AGATGACAAA TTTAGTTGAG CTTGACAAGC AGGCTCATAA ATTTATCATC GCTTATTTTA TAGCAAAACA AGAGCAAGAC GCCGATATGA ACTACATCAT AGAGGCTGGA ATTTTTGAGT TTTTAAGCAG GGTCGTAGTC ACAGACATAC GCCCTGACGT CTTTCACCAC ATCCAAAAGA CAAAAAAAGA GCAGATAAAT AGTTGGGTTT TAAGTAACCT TGAGACGCTC ATCTTAGATA TCGAAGGTGG CGAGTTTTTA GAGAGATTTA AAAACCACTA TAAAAACGAC AAAAGCCACG AAAAAGAGCG CCTTATACTA AAAGCAGCTA GCTATCTTGC CACGAGGTGG GAATTTTCTA TCGTCTATCA AACGAGCCAG TTTTTAAGCG ACATCGACGA GCTTAAGGCG AAGGTTGAAG AGGAGATGGA GGATTATTAC GAGTTAATTG GCGTTAGAAA GATCGCTATA AACCAAAAAC TAGCCCGTCT TGTTGATCTA AGTGGCAGGC TAAGGTTTCA AAAGCGCTGG GCACAAACGC CTCGCATCCC TGAAACTGCG GTCTTAGGAC ATATGCTAGT TGTTGCGATA CTTAGCTACT TTTACTCACT AAAAGCAAAA GCTTGCAAAA AACGCTTGGA AAATAACTTC TTTTGCGCGC TATTTCACGA CCTGCCAGAA AGCCTTACAC GCGACATCAT CAGCCCTGTA AAATACGGCG TAAAGGGGCT AAATGAGATC ATAAGCGAGT ATGAGATGAG GCTTATTGAT GAGAGGATTT TGCCATTTGT GCCTGAAAAG ATCAGAGATG AGTTTAGCTA CATCCTTGGT ATCAGAAAAG ATGGCGAGAA ATTTATAAAA GATGAGTTTG AAAATAGAAC ATTCGAGCGC AAGATCATCT GCCACGAAGG GACTATGGAG AACGTAAATG AGGATAAATT TAACCCGATC GATGGCAAAG CGCTAAAATA CTGTGACAAG CTCTCAGCCT ACATCGAAGC TGGAATTTCC ATAAGCTACG GCGTCAAGTC TAAAGAGCTA ACTGACGGCT TTAATAATAT GTATAAATTT TTTAGTGAAA AACCTAAGAT CGATGGAGTG GATTTTTTAG AAATTTGCGA TGATTTTAAT GAGCATTTTG GTTTAGAAAG ACCCCCTCTC AGATGA
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Protein sequence | MISAKLIEHI FKAASISRWN DYPKMTNLVE LDKQAHKFII AYFIAKQEQD ADMNYIIEAG IFEFLSRVVV TDIRPDVFHH IQKTKKEQIN SWVLSNLETL ILDIEGGEFL ERFKNHYKND KSHEKERLIL KAASYLATRW EFSIVYQTSQ FLSDIDELKA KVEEEMEDYY ELIGVRKIAI NQKLARLVDL SGRLRFQKRW AQTPRIPETA VLGHMLVVAI LSYFYSLKAK ACKKRLENNF FCALFHDLPE SLTRDIISPV KYGVKGLNEI ISEYEMRLID ERILPFVPEK IRDEFSYILG IRKDGEKFIK DEFENRTFER KIICHEGTME NVNEDKFNPI DGKALKYCDK LSAYIEAGIS ISYGVKSKEL TDGFNNMYKF FSEKPKIDGV DFLEICDDFN EHFGLERPPL R
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