| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1827 |
|---|
| Symbol | azlD |
|---|
| ID | 5597321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | - |
|---|
| Start bp | 22403 |
|---|
| End bp | 23821 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640928625 |
|---|
| Product | branched-chain amino acid transport protein |
|---|
| Protein accession | YP_001465947 |
|---|
| Protein GI | 157164089 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1115] Na+/alanine symporter |
|---|
| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTACAA ATTTTGCTGA AATTTTAAAT AACTGCGTTG AAAGTATAAA TTCATTTCTT
TGGGGTCCAT ACTTCCTTAT CGCCCTACTT TGCGGCACTG GACTATTTTT CACCATTAGA
CTTGGCTTTG TTCAGATTTT TAAGTTTAAA ATGGGTTTAG GCGAACTTTT TGGAAATTTC
TCACTTCACG GCGAGGCTGC TGGCAAGGCT GGCATGAGCT CGTTTCAAGC AGTAGCAACG
GCGATCGCGG CGCAAGTTGG CACGGGTAAC CTCGTGGGTG CGACGACAGC GCTTATCATG
GGCGGTCCTG GAGCCATTTT TTGGATGTGG TGTGCAGCAT TTTTGGGCAT GGCTACAAAT
TTTGCTGAAA TTTGCCTCGC TCAAATTTAC CGCACCAAAG ACGATAGTGG TCATACGATA
GGCGGTCCAG CCTTTTATAT AAGCCGTGGT TTAAAGGGCA AATGGGCGAA ATTTCTAGCT
GGATTTTTCG CTATAGCTAT CATCATCGCA CTTGGCTTTA TCGGTAATAT GGTTCAAGCA
AACTCCATAT CAGACGGCTT TAGCGGCGCT TTTGGCATAC CGCAGTGGCT AACAGGGGCG
TTTTTGGCTC TCATTTGCGC GCTAATTTTC ATAGGCGGCG TAAAAGCGAT CGCAAGGGTC
GCTGAAAAGA TCGTGCCACT AATGGCGCTA CTTTATATCG TTGTTGGCGT GGTTATCATC
GCTTTAAATT TTCACCAAAT CCCAGAGGCG ATCTCACTAA TATTTAAAGC TGCGTTTGAC
CCTTCGGCTG CTTGGGGTGG CGCAACTGGA GCTAGCATAG CAGCTGCTAT GAGATACGGC
ATCGCAAGGG GACTTTTCAG CAACGAAGCT GGCATGGGCT CGACTCCGCA CGCACACGCT
GCTGCAAACG TCAAACACCC AGTCGATCAA GCCGTCCTTG GCATAATGAG CGTCTTTATA
GACACCTTTG TCATCTTAAA TATCACCGTT TTTGTAGTAC TTACCGCAAA CGTCATCAGC
TTTGAAAACG GCAAAGCGGT CTTTACTGGC ATCACATTGG TACAAGAGGC CTTTTCGTCG
CATATATTTG GCAAAACTGG CGGTTATAGC TTCGTGGCGA TCTGCCTATT TTTCTTCGCA
TTTACGACGA TCATTGGCTG GTACTACTTC GCTGAGATCA ACGTGCGCTA CCTTTTTGGC
GCAAAGGCGG TTAAAATTTT TAAAATTTTA GTTGTCGTTT TTGTATTTTT GGGCAGCTTG
CAAAAGGTTG ATTTTGTCTG GAGTTTAGCT GATATGTTTA ACGGCCTTAT GGTCGTGCCA
AATTTGATCG CCATTATCCT TCTAAGCCCA GTCGTAGCTA AACTTTTAAA AGATCACGAC
GCTGGCAAAG AGTACGACGT AAAAGAGTAT TTGAAGTAA
|
|---|
| Protein sequence | MPTNFAEILN NCVESINSFL WGPYFLIALL CGTGLFFTIR LGFVQIFKFK MGLGELFGNF
SLHGEAAGKA GMSSFQAVAT AIAAQVGTGN LVGATTALIM GGPGAIFWMW CAAFLGMATN
FAEICLAQIY RTKDDSGHTI GGPAFYISRG LKGKWAKFLA GFFAIAIIIA LGFIGNMVQA
NSISDGFSGA FGIPQWLTGA FLALICALIF IGGVKAIARV AEKIVPLMAL LYIVVGVVII
ALNFHQIPEA ISLIFKAAFD PSAAWGGATG ASIAAAMRYG IARGLFSNEA GMGSTPHAHA
AANVKHPVDQ AVLGIMSVFI DTFVILNITV FVVLTANVIS FENGKAVFTG ITLVQEAFSS
HIFGKTGGYS FVAICLFFFA FTTIIGWYYF AEINVRYLFG AKAVKIFKIL VVVFVFLGSL
QKVDFVWSLA DMFNGLMVVP NLIAIILLSP VVAKLLKDHD AGKEYDVKEY LK
|
|---|
| |