| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1819 |
|---|
| Symbol | thrS |
|---|
| ID | 5596067 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | + |
|---|
| Start bp | 28230 |
|---|
| End bp | 30050 |
|---|
| Gene Length | 1821 bp |
|---|
| Protein Length | 606 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640928633 |
|---|
| Product | threonyl-tRNA synthetase |
|---|
| Protein accession | YP_001465955 |
|---|
| Protein GI | 157165430 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0441] Threonyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.196151 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATA TCATCGCATA CAAACTAAAT GGCGAAATAG TCGATACTCA AAGTATCGCA
GGGCGTGAGA GTAGTGCTGA GCCTATCTAT TTTGACAACT CAAAAGAGGC ACTACACGTT
ATCAGACACT CCTGTGCACA CCTCATGGCA CAAGCTATCA AATCACTCTA TCCAAAGGCG
AAATTCTTTG TCGGACCAAA CGTAGAAGAT GGATTTTATT ATGATTTTAG AGTTGATGAT
GAGGGCACGA AGCTAGGCGA GAGCGATCTA GCAGCGATCG AAGATAAGAT GAAAGAGCTT
GCTGAGAAGA AATTTGACAT AGTTAAAACC TGCTCAACCA AAGCTAATAT GAGTGAGAAA
TTTAAAAACG ACGATCTAAA ACAAGAGGTC TTAAAAAGAA TTCCAGATGG CGAAGTGAGC
AGCTACGCAC AAGGCGATTT TGAGGACCTT TGCCGCGGAC CACACCTGCC AAATACTAAA
TTTTTAAAAT TCTTCAAGCT CACACGCGTA GCTGGGGCGT ATCTTGGCGG CGATGAGAGC
CGTGAGATGC TAACTAGAAT TTACGGCACA GCATATGCCG ACAAAGAGAG CCTAAAAGAG
CACATCCGCA TCATCGAAGA GGCTAAAAAG CGCGATCACA GAAAGCTTGG CGTCGAGATG
AAGCTATTTA CATTTGATGA AGAAGTGGGC GGCGGTTTGC CTATCTGGCT GCCAAATGGC
GGACGCTTAA GATCAAAACT AGAGCAGCTC TTATACAAAG CTCACCGCGA CCGCGGCTAC
GAGCCAGTAC GTGGTCCTGA GCTTTTAAAG GCTGACGTGT GGAGAAGAAG CGGCCACTAC
GCAAACTATA AAGAAAATAT GTACTTTACA ACGATCGATG AGACAGAGTA TGGCATCAAG
CCGATGAACT GCGTTGGCCA CATCAAAGTC TATCAAAGTG ACATCCGCTC TTACCGCGAC
TTACCACTTA AATTTTTCGA GTATGGCGTC GTGCATCGCC ATGAGAAAAG CGGCGTGCTT
CACGGACTTT TTAGAGTTCG CGAATTTGCA CAAGATGACT CACATATCTT TTGTATGCCA
AGCCAGATCA AAGAAAATAT CTTAGAAATT TTAAAATTTG CTGGCACGAT AATGGAAAAT
TTTGGCTTCC ACTATGAGAT GGAGATATCA ACCAAGCCAG CCAAAGCGAT CGGCGGCGAT
GAAATTTGGG ATACAGCTAC AAAAGCGCTA AAAGAAGCTC TTGATGAAAA TGGCTTTAAA
TACGGCATAG ATGAGGGCGG CGGCGCATTT TATGGACCAA AGATCGACAT TAAGATAACT
GACGCGCTTA AGAGAAAGTG GCAGTGCGGT ACGATACAAG TCGATTTTAA CTTGCCAGAG
CGCTTTGATC TAGGCTACAT CGACGCAAAT AACGAAAGGC AGCGCCCTGT AATGCTTCAC
AGAGCCTTGC TTGGCAGTTT TGAGAGATTT ATAGGAATTT TACTTGAGCA CACTGCTGGC
GAGCTACCAT TTTTCATAGC TCCAACGCAG GTTGTCATCG TGCCTATTAG CGACGCGCAT
TTAGACTACG CAAAAGAAAT TTCACGCGAG CTAAGAAAGA TCAACGTCGA TAGCGAGATC
GCAAGTAAAA ATGAGAGTTT AAATAAGAGA ATAAGAACGG CAGAAAAACA AAGGGTGCCT
ATGATAGTCG TGCTAGGAGA CAACGAAGTA GCGAACAAAA GCGTTGCGTT GCGCGATAGA
CAGGCTAGGA CGCAGAGCGA TATGAGCTTG GCGGAATTTG TAAATTTAAC GAAGGAGAAA
CTTAGTGAGG TACATTTTTG A
|
|---|
| Protein sequence | MSDIIAYKLN GEIVDTQSIA GRESSAEPIY FDNSKEALHV IRHSCAHLMA QAIKSLYPKA
KFFVGPNVED GFYYDFRVDD EGTKLGESDL AAIEDKMKEL AEKKFDIVKT CSTKANMSEK
FKNDDLKQEV LKRIPDGEVS SYAQGDFEDL CRGPHLPNTK FLKFFKLTRV AGAYLGGDES
REMLTRIYGT AYADKESLKE HIRIIEEAKK RDHRKLGVEM KLFTFDEEVG GGLPIWLPNG
GRLRSKLEQL LYKAHRDRGY EPVRGPELLK ADVWRRSGHY ANYKENMYFT TIDETEYGIK
PMNCVGHIKV YQSDIRSYRD LPLKFFEYGV VHRHEKSGVL HGLFRVREFA QDDSHIFCMP
SQIKENILEI LKFAGTIMEN FGFHYEMEIS TKPAKAIGGD EIWDTATKAL KEALDENGFK
YGIDEGGGAF YGPKIDIKIT DALKRKWQCG TIQVDFNLPE RFDLGYIDAN NERQRPVMLH
RALLGSFERF IGILLEHTAG ELPFFIAPTQ VVIVPISDAH LDYAKEISRE LRKINVDSEI
ASKNESLNKR IRTAEKQRVP MIVVLGDNEV ANKSVALRDR QARTQSDMSL AEFVNLTKEK
LSEVHF
|
|---|
| |