Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_1765 |
Symbol | rplE |
ID | 5595952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | - |
Start bp | 1894523 |
End bp | 1895068 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640930438 |
Product | 50S ribosomal protein L5 |
Protein accession | YP_001467708 |
Protein GI | 157164844 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00103364 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAGAT TAAAAGATAA ATTTAACGAA ACTATCAAGC CAGCTCTCGT AAAAGAATTT GACATCAAAA ATCCAATGCT TATCCCTGCG CTCGAGAAGA TCGTGATCAG TGTAGGTGCT GGAGACTCTG CGAAAGATCA AAAAGTGCTT CAAAATATGG CTGATACCAT TTCACTTATC GCTGGACAAA AAGCGGTTAT CACTGATGCA AAAAAATCAG TTGCTGGCTT TAAAGTTCGC GAAGGTTTCC CTGTTGGTAT CAAAGTAACT TTGAGAAAAG AGCAAATGTA TGCTTTCTTA GATAAGCTAA TCAGCGTTGC TCTTCCAAGA GTTAAAGACT TCCGTGGTCT TCCAAAAAAT GGCTTTGATG GACGTGGAAA CTATAACTTT GGTCTTAGCG AGCAGCTAAT GTTTCCAGAG GTTGAGTATG ATAAAATTTT ACGAACTCAT GGTATGAATA TTACGATTGC TACTACGGCT AAAAATGATA AAGAGGCATT CAAATTGCTA GAGCTATTTG GTGTGCCGTT TGCAAAAGGA AAGTAA
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Protein sequence | MSRLKDKFNE TIKPALVKEF DIKNPMLIPA LEKIVISVGA GDSAKDQKVL QNMADTISLI AGQKAVITDA KKSVAGFKVR EGFPVGIKVT LRKEQMYAFL DKLISVALPR VKDFRGLPKN GFDGRGNYNF GLSEQLMFPE VEYDKILRTH GMNITIATTA KNDKEAFKLL ELFGVPFAKG K
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