| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1752 |
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| Symbol | rpsD |
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| ID | 5596182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | - |
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| Start bp | 1887939 |
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| End bp | 1888565 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640930426 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_001467696 |
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| Protein GI | 157164972 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000068654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTAGAT ATACAGGACC TGTTGAAAAA TTAGAAAGAC GTCTTGGTGT GTCTCTTGCG
TTAAAAGGCG AAAGAAGACT TGCTGGTAAA AGTGCTTTAG AAAAAAGACC TTATGCGCCA
GGACAACATG GACAAAGAAG AGCAAAAATA AGCGAATATG GCTTACAACT TCGCGAGAAG
CAAAAAGCTA AATTTATGTA TGGTGTTTCA GAGAAACAAT TTAGAAGATT GTTCCAAGAA
GCAGCACGCC GCGAGGGCAA CACTGGTGCT CTTTTGGTTC AACTACTAGA GCAGAGATTA
GACAATGTTG TTTACAGAAT GGGCTTTGCA ACGACTCGTC GTTTTGCTCG CCAGCTTGTA
ACTCACGGAC ATATTTTAGT AAATGGCAAG AGAGTGGATA TCCCATCTTA CAGAGTGGAG
CCAGGCTCTA AAGTAGAAGT TGCTGAGAAA TCTAAAAACA ATCCACAAAT CGTTCGCGCG
ATCGATCTTA CAGCTCAAAC TGGCATCGTT GCTTGGGTAG ATGTGGAAAA AGAGAAAAAA
TTTGGAATTT TCACTAGAAA TCCAGAAAGA GAAGAGGTTA TCATTCCTGT TGAGGAAAGA
TTTATAGTAG AGCTTTACTC AAAATAA
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| Protein sequence | MARYTGPVEK LERRLGVSLA LKGERRLAGK SALEKRPYAP GQHGQRRAKI SEYGLQLREK
QKAKFMYGVS EKQFRRLFQE AARREGNTGA LLVQLLEQRL DNVVYRMGFA TTRRFARQLV
THGHILVNGK RVDIPSYRVE PGSKVEVAEK SKNNPQIVRA IDLTAQTGIV AWVDVEKEKK
FGIFTRNPER EEVIIPVEER FIVELYSK
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