| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1736 |
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| Symbol | |
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| ID | 5597485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | - |
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| Start bp | 1876614 |
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| End bp | 1877513 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640930411 |
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| Product | geranyltranstransferase (farnesyl-diphosphate synthase; FPP synthase) |
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| Protein accession | YP_001467681 |
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| Protein GI | 157165525 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000234169 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCTAC TTGAGGACTT CGTAAAATTT CTAAATGCAA ATTTGCCAAA GGCGCCTAGC
TTTCATCCTT ACTACGAGGA GGCGCTTGGC GTTATGCTAA AGGCCGGAGG CAAGCACTTT
AGGGCGCTTT TGCTTCTTGG TGTGGTCGAA AATGTCGATA AAAGCCTCAC GCAAAAGGCG
ATGAGAGTGG CTTTGGGGCT TGAGATGATG CACACATACT CGCTCATCCA CGATGATCTG
CCGTCTATGG ATAACGCAAG CCTAAGGCGC GGCACACCAA CGCTTCACGT AACATACGAC
GAGACGACTG CGATACTTGC AGGAGATGCG CTAAATACGC ATGCTTTTTA TGAAATTTCA
CGTGCCGATT TACCAGCCGA CACTCGTATA AAGTGCGTTG AAATTTTAAG CCAGAATGCT
GGTGTTAGCG GCATGGTGCT AGGGCAGGCG CTGGATTGTT TTTTTGAAAA TACAAACAAA
GAGGACATCA AAAGAGCAAA GGCTAAATTT GGCCTCTCTG GCAAGATGCT AAGCCTTGAT
GAGCTAGTCT TTTTACACAT CCACAAAACC GCAAAGCTCA TCGCTGCTAG CCTAAAAATG
GGCGCTGTGA TAGTAAATTT AGACGAAAAA GAGTGCGATA AAATTTATGA TATCGGCCTA
AAGCTTGGGC TTGCTTTTCA GATACAAGAC GATATCATCG ATCTTACAAG CGACGAAGCG
GCCGCTGGAA AGCCCGTGCA TAACGATCTA GCTAAAAACT CATTTACAAA TTTACTAGGT
CTATCTGGCG CAAAAAAGAA AAAAGATGAG CTTATTTGCG AGATAGAAGA GGCACTAAAG
CAGATAGATG CAAACATTGC AAAGATGATC TTAGGGCTTA CAGACAAGCA TCTAAGATAG
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| Protein sequence | MSLLEDFVKF LNANLPKAPS FHPYYEEALG VMLKAGGKHF RALLLLGVVE NVDKSLTQKA
MRVALGLEMM HTYSLIHDDL PSMDNASLRR GTPTLHVTYD ETTAILAGDA LNTHAFYEIS
RADLPADTRI KCVEILSQNA GVSGMVLGQA LDCFFENTNK EDIKRAKAKF GLSGKMLSLD
ELVFLHIHKT AKLIAASLKM GAVIVNLDEK ECDKIYDIGL KLGLAFQIQD DIIDLTSDEA
AAGKPVHNDL AKNSFTNLLG LSGAKKKKDE LICEIEEALK QIDANIAKMI LGLTDKHLR
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