Gene CCC13826_1735 details

Gene Information

• Locus tag: CCC13826_1735
• Symbol: tkt
• ID: 5596001
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter concisus 13826
• Kingdom: Bacteria
• Replicon accession: NC_009802
• Strand: -
• Start bp: 1874596
• End bp: 1876506
• Gene Length: 1911 bp
• Protein Length: 636 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640930410
• Product: transketolase
• Protein accession: YP_001467680
• Protein GI: 157165524
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0021] Transketolase
• TIGRFAM ID: [TIGR00232] transketolase, bacterial and yeast

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.00492424
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTAAAAA AACAAGCCGA TACTATAAGA TTTTTGTGCG CTGATATGGT GCAAAACGCT 
AACAGCGGAC ACCCAGGTGC TCCTATGGGC CTAGCCGATA TCATGGTGGT TTTAAGCAAC 
TTTTTAAAAC ACAACCCTAA AAATCCAAAA TGGCTAAACA GAGATAGGCT CGTTTTTAGC 
GGTGGTCACG CATCAAGCTT GGTCTATAGC TTCTTACACC TAAGCGGCTA CGATCTAAGC 
CTAGATGAGC TTAAGAAATT TCGCCAACTT GGCTCAAATA CCCCAGGACA CCCAGAAATT 
CACACTCCAG GCGTTGAGAT GGCTACTGGC CCACTTGGTC AAGGCGTAGC AAATGCAGTT 
GGCCTTGCCA TGGCAGAAAA ATACGCTGCA AACGTGCTAA ATGAGCCAGA TAATAAAATA 
ATCGATCACA AAATTTACTG CCTTTGCGGC GATGGCGATC TTGAAGAGGG CATAAGCTAC 
GAGGCATGTT CAATCGCAGG AAATTTAAGA CTAGACAACC TTGTGCTCAT TTATGATTCA 
AACAACATCA CGATCGAGGG CGACACAGCG ATCGCATTTA GCGAGGATGT CAAGGCGAGG 
TTTGAGGCGC AGGGCTGGGA GGTCGCACGC ATCGACGGAC ACGACTACAA CCAGATCGAA 
TTTGCACTTG AGCAAGCAAG CGAGAAAGAG TCGCCATATC TCATCATCGC AAACACACAC 
ATAGCACGCG GCGCAATGGA GCTTGAGGGT AGCCACCACA GCCACGGCGC GCCACTTGGC 
GAGGAGATTA TCAAAAAGGC AAAGGCCGCA GCTGGCTTTG ACCCTGAGAA GAAATTTGCT 
ATCGACGAGG ACGTGCTTTT AAGATTTAGA GGTGCAGTTG AAAAGGGTGA TCTTGAAGAG 
GCGATGTGGA ACAAAAAGGT TGAGGCGTTA AGCATTGAAG GCAAAAATTT ATTAAACTCA 
CTTCTTAATC CAGACTTTAG CAAGATCGAA TTTCCAGACT TTAGCGACAA AAAGCTAGCC 
ACAAGAGATA CAAACCACGT TATTTTAAAC GAGATAGCTA AAAAACTTCC TGGCTTTATC 
GGTGGTAGCG CAGATCTTGC TCCTTCAAAC AAGACTGAGC TAAAGGGCAT GGGCGACTTC 
CCAAATGGCA AAAATATCCA CTACGGCATC AGAGAGCACG CCATGGCAGC GATCAATAAC 
GGCATCGCCA GATACGGCCT TTTCTTGCCA TTTTCAGCGA CATTTTTCAT CTTCAGCGAC 
TATCTAAAGC CAAGTGCGAG GATAGCAGCG CTAATGGGCA TCAAGCACTT TTTTGTCTTC 
ACACACGATA GCATCGGCGT TGGCGAAGAT GGTCCGACAC ATCAGCCTAT CGAGCAGCTT 
AGCACATTTA GAGCGATGCC AAATTTCTAC ACTTTTCGCC CAGCTGATGG CAACGAAAAC 
GCAGCTAGCT GGCAAGTGGC TCTAAATTTA AACGCTCCAA GCGCATTTGT GCTTAGCCGC 
CAAGGGCTTG ACCCACTTGC AAAAGGCGAA TTTGGCGAGG TTAGCAACGG CGCATATCTT 
TTAAGCTCGG CAAAAGATGC AAAGATCACA TTTATAGCAA GCGGCAGCGA GGTCTCACTC 
TGCGTAAAAG CAGCCGCACT TCTAGCTGAG CAAGGTATCG GTGCAAACAT CGTATCAGCA 
CCTTGTTTTG ATCTGCTTTG CGAGCAGCCA GCTGAGTATG TGGCTAGAAT TTTAGATAAA 
AATACAACCA TTATCGCAGT TGAGGCCGCA ACTGGCTATG AGTGGTATAA ATTTGCCGAC 
GCAGTTTATG GCATGAACAG CTTTGGCGCT AGCGGCAAGG CAAATGAACT ATTTGACCAC 
TTCGGATTTA CTCCGCAAAA GCTTGCAAAT TTTGCTAGCG AACTTATATA A 

 

Protein sequence

MLKKQADTIR FLCADMVQNA NSGHPGAPMG LADIMVVLSN FLKHNPKNPK WLNRDRLVFS 
GGHASSLVYS FLHLSGYDLS LDELKKFRQL GSNTPGHPEI HTPGVEMATG PLGQGVANAV 
GLAMAEKYAA NVLNEPDNKI IDHKIYCLCG DGDLEEGISY EACSIAGNLR LDNLVLIYDS 
NNITIEGDTA IAFSEDVKAR FEAQGWEVAR IDGHDYNQIE FALEQASEKE SPYLIIANTH 
IARGAMELEG SHHSHGAPLG EEIIKKAKAA AGFDPEKKFA IDEDVLLRFR GAVEKGDLEE 
AMWNKKVEAL SIEGKNLLNS LLNPDFSKIE FPDFSDKKLA TRDTNHVILN EIAKKLPGFI 
GGSADLAPSN KTELKGMGDF PNGKNIHYGI REHAMAAINN GIARYGLFLP FSATFFIFSD 
YLKPSARIAA LMGIKHFFVF THDSIGVGED GPTHQPIEQL STFRAMPNFY TFRPADGNEN 
AASWQVALNL NAPSAFVLSR QGLDPLAKGE FGEVSNGAYL LSSAKDAKIT FIASGSEVSL 
CVKAAALLAE QGIGANIVSA PCFDLLCEQP AEYVARILDK NTTIIAVEAA TGYEWYKFAD 
AVYGMNSFGA SGKANELFDH FGFTPQKLAN FASELI