Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_1638 |
Symbol | |
ID | 5597497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | - |
Start bp | 159727 |
End bp | 161109 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640928770 |
Product | 30S ribosomal protein S12 |
Protein accession | YP_001466086 |
Protein GI | 157165073 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.240044 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATA AGGCGTTTAT ACTTATAACA GCGGCGTTTT TGGCTGGTTG CTCGTTTCGC CCAGATATGC CAAATGTGGA TACAAATTTT ACCTCAACAT ACACTTTCGA GACAAGCGAT ATAAGAGATC TTTGGTGGAA GGAATTTAAA GATGAAAATT TAAATATTCT TGTTGAAAGT GCGCTTGAGA AAAATACAAA TTTACGCATC GCATATTTAA ATTTAGAGAA GGCAAAGGCG AGCCTTGGCG TTGCTGAGGC TAGCTTGCTC CCTGGGGTAA ATTTAAATGT AAGTTATACC AAAGCAAAAA CCAGCGGTGA AACTTACACT GGGCAGCCTC AAACACGCTA TAGAAGCTCT AGCATAAATT TAGGGCTAAA CTATGAGATA GATCTTTGGG GTAGAGTAAG AAATAGCGTG CTTGCAGCTA ATGAAAATTT AAATGCGAGC AAATTTGACT ATGATAGCGC CAGACTAAGC CTTAGCTCAA GTGTGGCAAA AAGCTACTTT GCTCTAGTGT CACTAAACAT GCAAGAAGCG GTGCTAAAAG AGACACTAAA AACCTATGAG GACACGCTGG CACTTCGAAA GACGCAGCTT GATCTTGGTG GCATAAATGA GATGACCTAT CTACAAAGCA AAGCTGAGGT TGAAAGGGCA AAAACTAGCC TAACTTCAGT GCTAAACTCA AAGTCGCAAG CGCTTACTTC GCTAGCCATC CTAACTGGCA AGAGCAATGA TGAAATTTTA AAAGGAGCCG TTGCTAGTGC GCAAAATTTA CCAAGCTCGC CTGAGATAAA GGCTGGCATC AGCTCAGATG TTTTGCTTAG AAGAAGTGAC GTGGCAAAGG CGCTAGCAGA TCTAAAAGCT ACAAATGCCC TTGTGGGCGT AGCAAAGGCT GATTATTTCC CTACGATCTC ACTCACTGGA CTTTTGGGCT TTACAAGTAT TGATTTTGAA AATATATTTG TAGGAAATGC CAATACTTGG AACATAGGTG GCTCTTTAGC TCAAAAGATA TTTGACTATG GCAGGACAAA AAACAATGTC CGAGTTGCTG AGACAAACGA GCAAATCGCG GCCGTCACTT ACGAAGCGAC TGTTAGATCA GCCCTTGGTG AGGTTAGAGA TGCCCTTATA TCAAGGCAAA ACGCAAAGCT CTCTTTGGAT CAGGTGAAAA ATTTGCTACA ATCGCAGCAA AAAATTTATT CGCTTGCTAA AGATCAGTAT AACGCTGGCT ATATTGGTCA CTTAGAGCTT CTTGATGCAC AGAGAAATTT GCTTCAAGCA AAGCTTCAAG ATATCTCAGC TAAGCTTGAT GAGGTAGATA GCGCGGTCGA AGTTTATAGA GCACTTGGCG GCGGATTTAA GGTAGATAAA TAA
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Protein sequence | MKNKAFILIT AAFLAGCSFR PDMPNVDTNF TSTYTFETSD IRDLWWKEFK DENLNILVES ALEKNTNLRI AYLNLEKAKA SLGVAEASLL PGVNLNVSYT KAKTSGETYT GQPQTRYRSS SINLGLNYEI DLWGRVRNSV LAANENLNAS KFDYDSARLS LSSSVAKSYF ALVSLNMQEA VLKETLKTYE DTLALRKTQL DLGGINEMTY LQSKAEVERA KTSLTSVLNS KSQALTSLAI LTGKSNDEIL KGAVASAQNL PSSPEIKAGI SSDVLLRRSD VAKALADLKA TNALVGVAKA DYFPTISLTG LLGFTSIDFE NIFVGNANTW NIGGSLAQKI FDYGRTKNNV RVAETNEQIA AVTYEATVRS ALGEVRDALI SRQNAKLSLD QVKNLLQSQQ KIYSLAKDQY NAGYIGHLEL LDAQRNLLQA KLQDISAKLD EVDSAVEVYR ALGGGFKVDK
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