| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1629 |
|---|
| Symbol | |
|---|
| ID | 5595915 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | + |
|---|
| Start bp | 790715 |
|---|
| End bp | 791764 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640929356 |
|---|
| Product | R2.LlaJI |
|---|
| Protein accession | YP_001466652 |
|---|
| Protein GI | 157165196 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0248162 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTCTA AAAAGGAAAA AGAAAGCGGG GAAAAGGAAG TAGAGCAAAA CGAGAAAAAG
GGCGTGGCAA AACCGCCAGT GCTCTTTAGC GATACTCAAA ATTTGATAAG TACGATCGAA
AAAAGGCTAA ATGCCCCTTT GATAACCTAC TACAACTCAA ACGCTGGTAA TGTCTGCGGC
AATGATGCAA GTGCGATGTA TGAAATTTTA AAGGGCAAAA AGATAGATAC TGCCTACCTT
TTCATAAAAA GTGACGGCGG AAGCGGAATA GCTGCGCTTA GGATCATTAG CACCCTTAGA
AACTACTGCA AAAATTTAAT AGCGCTGATC CCTTCAAACT GCGCCTCAGC TGCTACGATG
ATGGCACTTG GCGCAAATGA GATCGTAATG GGGCCACTTG CCTATCTAAC GCCAGTTGAT
ACCTCTTTAA AACACGAGCT AAGTCCTACA AACAAGGGCA ACGAGCTAGT TAGCGTCTCT
ATGGACGAGC TTAGCCGTGT AGTCAAGCTT TGGAAAGAGC AGGACAAAGA TAGACCAAAC
GATACAAACC CCTATAACTC GCTATATGAG TATATCCATC CGCTAGTTTT TGGTGCGGTT
GATCGCGCTA GCTCGCTTTC GCTTAAAATT TGCTCTGAAC TACTTAGATA TCACATAGAT
GATGATAAAA AGATCGTTGA AATTTCAGAG CGACTAAACG CAGACTACCC AGCACACGAG
TATCCGATAC TCTTTCGTGA GGCGCAGGAG ATCGGCCTGC ATGTCAAAAA GATGGACGAT
GATCTTAACG AGATGCTTCA GGAGCTAACG CTACTTTACT CAGAGATGGG ACAGCGCGCC
TTTACCGACT ACGATGAGAA CAGCTATCAC GATAACAACA TCGCAAACAT CATAGAGACA
AACGGCAAGC AAATTTACTA TCAGATCGAT AAAGACTGGT TTTATCGCCC TGAGGAGCGC
CGCTGGAACG TGATGAATGA CGAGAGCTCG TGGCGCAAAA ATGAGCTAGT AAATGGCAAG
ATAAAAAATA CAATCTATCA CTTGTGGTAA
|
|---|
| Protein sequence | MFSKKEKESG EKEVEQNEKK GVAKPPVLFS DTQNLISTIE KRLNAPLITY YNSNAGNVCG
NDASAMYEIL KGKKIDTAYL FIKSDGGSGI AALRIISTLR NYCKNLIALI PSNCASAATM
MALGANEIVM GPLAYLTPVD TSLKHELSPT NKGNELVSVS MDELSRVVKL WKEQDKDRPN
DTNPYNSLYE YIHPLVFGAV DRASSLSLKI CSELLRYHID DDKKIVEISE RLNADYPAHE
YPILFREAQE IGLHVKKMDD DLNEMLQELT LLYSEMGQRA FTDYDENSYH DNNIANIIET
NGKQIYYQID KDWFYRPEER RWNVMNDESS WRKNELVNGK IKNTIYHLW
|
|---|
| |