| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1616 |
|---|
| Symbol | |
|---|
| ID | 5597529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | + |
|---|
| Start bp | 778519 |
|---|
| End bp | 779301 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640929343 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001466639 |
|---|
| Protein GI | 157164295 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2966] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCA AGCCTGATAT CCAAATCTTA ACGAATTTTT TAGCCGAATA TACGACAGCT
ATGGTGAGTG CTGGCACATA CACTGCGCGT GTAGAAAAGT GCGTAGACCG CATAGCTAAT
CACTACGGAT ACGACGTTAG CGTGACGATT TTTGTGAAGT ATTTTACCAT TAGCGTGATG
GACTCGGCTG ACAACTCCCT GCGCCGAACT TATGTAAGAA AGATCCCGTT AGGGCACGTT
AGTTTTAACA GAATTTCCGA GCTATCATCG CTTAGCTGGC AAATTTTAGA TGAGGGCTTG
AGCTTAGATG AAGCTAAAGA GAGCTTTGAT GGCGTGATGA GTGTTGGTGC AAATAAATTT
GCTAGCTCGC TTATCTTGAT AAGCCTTGCA AATGCGGCAT TTTGCAGACT TTTTGGAGGC
GATGCTGGCT CAGTTGTTTG CATATTTTTT GCAACGCTTG TTGGCTATAC TCTTAAATTT
GCCCTTGCAA AAATGGGCGT AAATTTAAAA ATCCAATACG TCCTGACATC CTTTGTCGTC
TCATTTATCG CCTATCTTGG CGTATCTTAC GGACTTACGC ACACAAGCGA TGTAGCGATA
GGCTCGTCTG TGCTCTTTAT GATGCCTGGC GTTTTTCTCA TAAATTCAGT CTTTGACATC
CTAAACGACA ACACTCTTGT TGGCATCAGC AGAGCCATAA GCACGGGCAT CCTCATACTT
TGCATGGCTG TTGGCGTCTA TATCACGCTA ACGCTTAGCA GCGCGGAGAT ATTAAATGTT
TGA
|
|---|
| Protein sequence | MNAKPDIQIL TNFLAEYTTA MVSAGTYTAR VEKCVDRIAN HYGYDVSVTI FVKYFTISVM
DSADNSLRRT YVRKIPLGHV SFNRISELSS LSWQILDEGL SLDEAKESFD GVMSVGANKF
ASSLILISLA NAAFCRLFGG DAGSVVCIFF ATLVGYTLKF ALAKMGVNLK IQYVLTSFVV
SFIAYLGVSY GLTHTSDVAI GSSVLFMMPG VFLINSVFDI LNDNTLVGIS RAISTGILIL
CMAVGVYITL TLSSAEILNV
|
|---|
| |