| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1435 |
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| Symbol | |
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| ID | 5595584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | - |
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| Start bp | 1152979 |
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| End bp | 1153737 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640929708 |
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| Product | RNA pseudouridine synthase family protein |
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| Protein accession | YP_001466990 |
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| Protein GI | 157165235 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.540473 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAG AAAAAGCGTA TAAAATTTTA GCCAAGCAAA AAAATATCTC AAACAATGAG
GCAAAGGAGC TAATCGACAG CGGACTAGTC TATGCTAAGG GGCAAAAGGT GATGATCGCT
CGTGCGCTAA TGAGCGAAAA TACTAAATTT AGCATCGAAG AGATGCCAAA GCCTAGCGTT
ATCTTTGAAG ATGAAAATTT AATAGCTATT AACAAACCAG CTGCCATAAC TAGCGAAAAA
ATCAGTCAAA TTTATAAATT TCCACTACTT CACAGGCTCG ATAAAGACAC AAGCGGCGTG
CTGCTTCTTG TAAAAAATGA CGAATTTGCG AGCCTTGCCA TAAATGAGTT TAAAAAGATG
AAGGTTGAGA AAATTTACGT GGCCGCAGTT AGGGGCATCA TGAGCGAGGA GGTCGTCGTA
AATGAGCCGA TCTTAACGAT AAAAAATAAA AATGGCGCCT TCTCAAAGAT CTCAAAAGAT
GGCAAAGAGG CGATCAGTGA AATTTCACCG CTCATGGTTG TGGGCAAAAA AACGCTTGTA
AAAGTTGTCA TAAAAACAGG CAGGACGCAT CAGATAAGAG TGCATTTGGC TAGTTTAAAT
TTACCTATCG TTGGCGATGA GAAATACGGC AAAAATAGGG CAAATAGAAT GTTTTTGCAT
GCCTATTCTA TCGCTCTTTT AGACTATAAA TTTAAAGCGC CGATCCCAAG AGAATTTAAC
TCTCTTGGAT TTGAACTATC TAATAAATTT GAAATTTAA
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| Protein sequence | MSEEKAYKIL AKQKNISNNE AKELIDSGLV YAKGQKVMIA RALMSENTKF SIEEMPKPSV
IFEDENLIAI NKPAAITSEK ISQIYKFPLL HRLDKDTSGV LLLVKNDEFA SLAINEFKKM
KVEKIYVAAV RGIMSEEVVV NEPILTIKNK NGAFSKISKD GKEAISEISP LMVVGKKTLV
KVVIKTGRTH QIRVHLASLN LPIVGDEKYG KNRANRMFLH AYSIALLDYK FKAPIPREFN
SLGFELSNKF EI
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