Gene CCC13826_1289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCCC13826_1289 
Symbol 
ID5597446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter concisus 13826 
KingdomBacteria 
Replicon accessionNC_009802 
Strand
Start bp1028530 
End bp1030713 
Gene Length2184 bp 
Protein Length727 aa 
Translation table11 
GC content39% 
IMG OID640929584 
ProductTonB-dependent receptor domain-containing protein 
Protein accessionYP_001466875 
Protein GI157165561 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID[TIGR01783] TonB-dependent siderophore receptor 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00967025 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTTACA AAATCTCGGT TGCAACATGT GCTGCGCTCT TGATGTGCAG TGGTTTTTTA 
AGTCAAGTTT TTGCTGTGCA AACGACAAAG CTTGAGGGCG TTGAAGTAAA TTCTGTCGGT
GATAACATCA GTGAAAGCGG TATCGATGAG GGAATTTTAA GCAAAAGAGT AGCCGCTGGT
CCTTTGGCTG ATAAAAAAGT TTTAGATATG CCTTATCAAG TAAATACGAT CTCAAAAGAG
GTGCTTGATA ACCAAGGCGT TCAAGGCTTT GAAGATGCAG TTAGGTACTT TCCTTCAGCT
TCTATTCAGT ATCGTGGCGG TGGCGATGTT GGTCGTCCGC AAACCCGTGG TTTTCAAGGC
TCAGTTGTAG GTAACGTTCT TTGGGACGGC TTTTACTCTA CATCTACCAC AGCTATACCT
ATGGCTATGT TTGAGAGCTT GCAAATTCAA AATGGACTTG CTGGCTCTCT TTATGGCGGT
GCTACACCTT CAGGATATTT CCTCTACTCT CGTAAGCGTC CAGTTCCGCT TCAAAATATC
ATCTGGACTG ATTATAGCTC AAGGTCAAAT TTAGGCGTCG GACTTGATAC TTCAAATAAA
TTTGAAAAAG TTGGATATAG AGGCGTCTTT TACTACTCAG GCGGAGAAAA GAACGCTAAA
GATAGTAAAT TCTCTCGTCG CTTAGCCTCA TTAGGACTTG ATTTTTACCT TACAGAGAAT
TTAACACTTG AGACAAACTT TAGCCATTAT GAGCATAAAA ACTCAGGTAT GCCAGGTGCT
TTTAGTATGC CACTAACAAA CGGAGTGGCA AAATTTGATG TACCAAGCCC TGTAAAAGAT
ACAAAAAGAG GGCTTGAACA AACATTTGGT GGTAATCACC TAAAAACAAC GACAGCTAGC
ATAAAGCTAA AATACGCTCC AAGTGAGAGC TGGTACTTTG AGGGTGGTTA TCAGTGGCAA
AAGGCTATCA GAGATATGTA TGGTACAAGC GGTACATTTT TAAATCAAAA TGGAGATTAT
AGAGTTGTTA AAAGTGGAGG CAGTGGCGCA TCTGGTAGAT TTGATGTAGA TAGTTGGTTT
TTAAAAGGTT TGACAAATTT TGAAACAGGT TCTTTATCAC ATAATTTTGC CGTAGCTACA
AATGGATATC GCTGGACTAT TTATAGTGCT AGAAATAGTG GTGGTAGAGC AAATCTTGGC
ACGTCAAATT TGTATAACCC AGTAATCTTT AATGATCCAC ATGTAGCAAA AGGAAGTGGC
AGATATAAAA GCAGTAGTAG CAATATGAAA AATATATCTG TTGTTGATGA TATTAAATTC
AATGACTACT TCAGCACTAT CTTATCAGTT TCAAGAAGCT GGTTTAAAAG CTATAAGTTA
GATCCTTCTA AAGAGAAAAA TTACGATAAA AGTGGCTTTA ACTATGGCGT AAGTCTTGTT
TATAAACCAG TTGAAAACGT AAGCCTTTAT ACAACTTATG CAGATAGCAT TTCAAATGAA
GGAACAACAT ATACATTTTC AAACGGAGCT AGAAAAGGCG AGACTTTAGT GGTAGAACCA
TTTAGAAGCA AACAATATGA GATCGGCGCA AAAGCTAGAC TAGGTGAGCT TGATCTATCA
GCTGCTATCT TTGAGATAAA GCGTCCTATA GCATATCTAG TCGGTAGCGG AGCAAATGCT
GATTTTAAAG TTCAAGGCAC ACAAAGAAAC CGCGGCTTCG AGCTAACTAC TGGTGGAAAG
CTTGTTGATA CATTGAGTAT GTATGGTGGC TTTACACTTC TTGATGCTAA GATAAAAAAT
GCTAAAGATG GCGTGTCTGA GGGCAAAACG GTTATCGGTG AGCCAAAATT TCAAGCAAAT
GTCTTGTTTG ACTACGCAGT TCCTAGCACA AACAAACTTG CATTTACAAC AAATTTCCAC
TACACAGGCA AACGCTACAT CGACAATGCC AACGCTCATA GTGTAAATGG CTACTTTACA
ACCGATGTTG GAGCTAGATA CACTACAAAA GCTTGGTTAG GCAAAGAGAC AACTATAAGA
TTTGATATAA ATAACCTCTT TGATAAAAAA TACTGGGCAG GAATGTTCCC ATCTGATGTG
GATGGAGCGA TTGCTGGACG CGGAACTTCA CTTTTCTTAG GACAAAGCAG AACCTTCATG
CTTTCAGCTC AGGTTAAATT CTAA
 
Protein sequence
MSYKISVATC AALLMCSGFL SQVFAVQTTK LEGVEVNSVG DNISESGIDE GILSKRVAAG 
PLADKKVLDM PYQVNTISKE VLDNQGVQGF EDAVRYFPSA SIQYRGGGDV GRPQTRGFQG
SVVGNVLWDG FYSTSTTAIP MAMFESLQIQ NGLAGSLYGG ATPSGYFLYS RKRPVPLQNI
IWTDYSSRSN LGVGLDTSNK FEKVGYRGVF YYSGGEKNAK DSKFSRRLAS LGLDFYLTEN
LTLETNFSHY EHKNSGMPGA FSMPLTNGVA KFDVPSPVKD TKRGLEQTFG GNHLKTTTAS
IKLKYAPSES WYFEGGYQWQ KAIRDMYGTS GTFLNQNGDY RVVKSGGSGA SGRFDVDSWF
LKGLTNFETG SLSHNFAVAT NGYRWTIYSA RNSGGRANLG TSNLYNPVIF NDPHVAKGSG
RYKSSSSNMK NISVVDDIKF NDYFSTILSV SRSWFKSYKL DPSKEKNYDK SGFNYGVSLV
YKPVENVSLY TTYADSISNE GTTYTFSNGA RKGETLVVEP FRSKQYEIGA KARLGELDLS
AAIFEIKRPI AYLVGSGANA DFKVQGTQRN RGFELTTGGK LVDTLSMYGG FTLLDAKIKN
AKDGVSEGKT VIGEPKFQAN VLFDYAVPST NKLAFTTNFH YTGKRYIDNA NAHSVNGYFT
TDVGARYTTK AWLGKETTIR FDINNLFDKK YWAGMFPSDV DGAIAGRGTS LFLGQSRTFM
LSAQVKF