Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_1289 |
Symbol | |
ID | 5597446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | - |
Start bp | 1028530 |
End bp | 1030713 |
Gene Length | 2184 bp |
Protein Length | 727 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640929584 |
Product | TonB-dependent receptor domain-containing protein |
Protein accession | YP_001466875 |
Protein GI | 157165561 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00967025 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGTTACA AAATCTCGGT TGCAACATGT GCTGCGCTCT TGATGTGCAG TGGTTTTTTA AGTCAAGTTT TTGCTGTGCA AACGACAAAG CTTGAGGGCG TTGAAGTAAA TTCTGTCGGT GATAACATCA GTGAAAGCGG TATCGATGAG GGAATTTTAA GCAAAAGAGT AGCCGCTGGT CCTTTGGCTG ATAAAAAAGT TTTAGATATG CCTTATCAAG TAAATACGAT CTCAAAAGAG GTGCTTGATA ACCAAGGCGT TCAAGGCTTT GAAGATGCAG TTAGGTACTT TCCTTCAGCT TCTATTCAGT ATCGTGGCGG TGGCGATGTT GGTCGTCCGC AAACCCGTGG TTTTCAAGGC TCAGTTGTAG GTAACGTTCT TTGGGACGGC TTTTACTCTA CATCTACCAC AGCTATACCT ATGGCTATGT TTGAGAGCTT GCAAATTCAA AATGGACTTG CTGGCTCTCT TTATGGCGGT GCTACACCTT CAGGATATTT CCTCTACTCT CGTAAGCGTC CAGTTCCGCT TCAAAATATC ATCTGGACTG ATTATAGCTC AAGGTCAAAT TTAGGCGTCG GACTTGATAC TTCAAATAAA TTTGAAAAAG TTGGATATAG AGGCGTCTTT TACTACTCAG GCGGAGAAAA GAACGCTAAA GATAGTAAAT TCTCTCGTCG CTTAGCCTCA TTAGGACTTG ATTTTTACCT TACAGAGAAT TTAACACTTG AGACAAACTT TAGCCATTAT GAGCATAAAA ACTCAGGTAT GCCAGGTGCT TTTAGTATGC CACTAACAAA CGGAGTGGCA AAATTTGATG TACCAAGCCC TGTAAAAGAT ACAAAAAGAG GGCTTGAACA AACATTTGGT GGTAATCACC TAAAAACAAC GACAGCTAGC ATAAAGCTAA AATACGCTCC AAGTGAGAGC TGGTACTTTG AGGGTGGTTA TCAGTGGCAA AAGGCTATCA GAGATATGTA TGGTACAAGC GGTACATTTT TAAATCAAAA TGGAGATTAT AGAGTTGTTA AAAGTGGAGG CAGTGGCGCA TCTGGTAGAT TTGATGTAGA TAGTTGGTTT TTAAAAGGTT TGACAAATTT TGAAACAGGT TCTTTATCAC ATAATTTTGC CGTAGCTACA AATGGATATC GCTGGACTAT TTATAGTGCT AGAAATAGTG GTGGTAGAGC AAATCTTGGC ACGTCAAATT TGTATAACCC AGTAATCTTT AATGATCCAC ATGTAGCAAA AGGAAGTGGC AGATATAAAA GCAGTAGTAG CAATATGAAA AATATATCTG TTGTTGATGA TATTAAATTC AATGACTACT TCAGCACTAT CTTATCAGTT TCAAGAAGCT GGTTTAAAAG CTATAAGTTA GATCCTTCTA AAGAGAAAAA TTACGATAAA AGTGGCTTTA ACTATGGCGT AAGTCTTGTT TATAAACCAG TTGAAAACGT AAGCCTTTAT ACAACTTATG CAGATAGCAT TTCAAATGAA GGAACAACAT ATACATTTTC AAACGGAGCT AGAAAAGGCG AGACTTTAGT GGTAGAACCA TTTAGAAGCA AACAATATGA GATCGGCGCA AAAGCTAGAC TAGGTGAGCT TGATCTATCA GCTGCTATCT TTGAGATAAA GCGTCCTATA GCATATCTAG TCGGTAGCGG AGCAAATGCT GATTTTAAAG TTCAAGGCAC ACAAAGAAAC CGCGGCTTCG AGCTAACTAC TGGTGGAAAG CTTGTTGATA CATTGAGTAT GTATGGTGGC TTTACACTTC TTGATGCTAA GATAAAAAAT GCTAAAGATG GCGTGTCTGA GGGCAAAACG GTTATCGGTG AGCCAAAATT TCAAGCAAAT GTCTTGTTTG ACTACGCAGT TCCTAGCACA AACAAACTTG CATTTACAAC AAATTTCCAC TACACAGGCA AACGCTACAT CGACAATGCC AACGCTCATA GTGTAAATGG CTACTTTACA ACCGATGTTG GAGCTAGATA CACTACAAAA GCTTGGTTAG GCAAAGAGAC AACTATAAGA TTTGATATAA ATAACCTCTT TGATAAAAAA TACTGGGCAG GAATGTTCCC ATCTGATGTG GATGGAGCGA TTGCTGGACG CGGAACTTCA CTTTTCTTAG GACAAAGCAG AACCTTCATG CTTTCAGCTC AGGTTAAATT CTAA
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Protein sequence | MSYKISVATC AALLMCSGFL SQVFAVQTTK LEGVEVNSVG DNISESGIDE GILSKRVAAG PLADKKVLDM PYQVNTISKE VLDNQGVQGF EDAVRYFPSA SIQYRGGGDV GRPQTRGFQG SVVGNVLWDG FYSTSTTAIP MAMFESLQIQ NGLAGSLYGG ATPSGYFLYS RKRPVPLQNI IWTDYSSRSN LGVGLDTSNK FEKVGYRGVF YYSGGEKNAK DSKFSRRLAS LGLDFYLTEN LTLETNFSHY EHKNSGMPGA FSMPLTNGVA KFDVPSPVKD TKRGLEQTFG GNHLKTTTAS IKLKYAPSES WYFEGGYQWQ KAIRDMYGTS GTFLNQNGDY RVVKSGGSGA SGRFDVDSWF LKGLTNFETG SLSHNFAVAT NGYRWTIYSA RNSGGRANLG TSNLYNPVIF NDPHVAKGSG RYKSSSSNMK NISVVDDIKF NDYFSTILSV SRSWFKSYKL DPSKEKNYDK SGFNYGVSLV YKPVENVSLY TTYADSISNE GTTYTFSNGA RKGETLVVEP FRSKQYEIGA KARLGELDLS AAIFEIKRPI AYLVGSGANA DFKVQGTQRN RGFELTTGGK LVDTLSMYGG FTLLDAKIKN AKDGVSEGKT VIGEPKFQAN VLFDYAVPST NKLAFTTNFH YTGKRYIDNA NAHSVNGYFT TDVGARYTTK AWLGKETTIR FDINNLFDKK YWAGMFPSDV DGAIAGRGTS LFLGQSRTFM LSAQVKF
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