Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_1272 |
Symbol | hisS |
ID | 5596341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | + |
Start bp | 1007768 |
End bp | 1008994 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640929568 |
Product | histidyl-tRNA synthetase |
Protein accession | YP_001466859 |
Protein GI | 157165317 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0124] Histidyl-tRNA synthetase |
TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0694221 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAACGG CACTTCGTGG CATGAAAGAT ATGCTTCCAG CTCGCGCAAA ACTTTATGCA CAGATAATCA AAACCTGCGA GGAAGTCGCA AAAAACTACG GATATGAGCA AATTTTGACC CCGCACCTCG AGGAGACGGC GCTTTTTAAA AGAAGTGTCG GCGAGAGCAG TGACATCGTT GGCAAAGAGA TGTATCAGTT TGAAGACAAA GGCGGCAACG ATGTTTGCTT GCGTCCTGAG GGCACGGCTG GCGTGGTTAG AGCCTTTATC GAGGCAAAAC TTGACAGGGC AAATGTGACA AAACGCTGCT TTTATCACGG CTCGATGTTT CGCTACGAGC GCCCACAAAA AGGCCGCTTG AGAGAGTTTC ACCAGTTTGG TTGTGAGTGC TTTGGCGAGG GCAGCGTCTA TGAGGATGCG AGCATTATCT TGATGGTGAG CGAAATTTTT AATAGACTAA ATATAAAAAC AACCCTAAAA ATAAACTCAC TTGGCGACGA GAGCTCGATG AAGTCTTACA AAGAAAAGCT TGTTAAATTT CTAGATGAAA ATGACGATAA AATTTGCGAG GACTGCAAAA GACGCAAGCT TTTAAACCCT ATCCGCGTGC TTGACTGCAA GATAGAAAGC TGCCAAGAAA TTTACAAAAA CGCTCCAGTT ATCACTGATA GTCTAAGCGA TGAGGCGCAG GCTGATTTTG CAAAACTGCA AGAAATTTTA ACGGCAAATG GCGTTAAATT TGAGATAGAC ACTAAGCTCG TTCGTGGGCT AGACTACTAC TGCAAGACGG CGTTTGAGTT TATAAGCAAT GAGATCGGCT CACAAAGTGC GGTTGCAGGT GGCGGCAGAT ACGATAGGCT CGTTGAATAT CTTGGCGGTA GAGCAAGTTA TGGCGTTGGC TTTGCGATGG GCGTTGAGAG GATAATGGAA ATTTTAGGTG AAGCTGGAGA TGAGCGAGAC GGAGTTTATC TTTGCGCGCT TGATGCGGCA AATGTTGATT TTATCTATAA TCTTGGCTCA AAGCTTCGCA AAAAATATCA GGTTGAAATT TCTTATGAAG CTAAAAAACT TCAAAAACAT CTGCAAAATG CCGACAATAA AAATGCAAAA ATTTTCCTTT GCGTGGGCGA AAACGAGATG AAAGAGAATA AAATTTGGTA TAAAAATTTA GAAACCAAAG ATGAAAAAAC GATAAATTTA GATGAGCTTG AAAAGGAGCT GGGATGA
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Protein sequence | MITALRGMKD MLPARAKLYA QIIKTCEEVA KNYGYEQILT PHLEETALFK RSVGESSDIV GKEMYQFEDK GGNDVCLRPE GTAGVVRAFI EAKLDRANVT KRCFYHGSMF RYERPQKGRL REFHQFGCEC FGEGSVYEDA SIILMVSEIF NRLNIKTTLK INSLGDESSM KSYKEKLVKF LDENDDKICE DCKRRKLLNP IRVLDCKIES CQEIYKNAPV ITDSLSDEAQ ADFAKLQEIL TANGVKFEID TKLVRGLDYY CKTAFEFISN EIGSQSAVAG GGRYDRLVEY LGGRASYGVG FAMGVERIME ILGEAGDERD GVYLCALDAA NVDFIYNLGS KLRKKYQVEI SYEAKKLQKH LQNADNKNAK IFLCVGENEM KENKIWYKNL ETKDEKTINL DELEKELG
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