Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_1254 |
Symbol | |
ID | 5596708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | - |
Start bp | 990012 |
End bp | 992180 |
Gene Length | 2169 bp |
Protein Length | 722 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640929550 |
Product | flagellar P-ring protein (basal body P-ring protein) |
Protein accession | YP_001466842 |
Protein GI | 157163917 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAGT TTAAATTTTT AAAATTCCTT GCCCTATTTT TGGCTTTAGT GGTCGCTATT TTTTTGATAC TTGATCAAAT TTATCCACTA AATTTAGACG CACTCAAAAA AGACGAAGCC AAAATTTTGC TTGATAAAAA TGGCGAGATC ATAAATATGA AGCTTAGTAG CGACGGAATT TGGAGATTTC ACGAGCAAAG CTTCCCAAAC TCGCTAAAAC AATGCGTCGT GCTCTTTGAA GATAGATACT TTTACTACCA TTTTGGCGTA AATTTTGCCT CCATTTTTAG AGCATTTTTC CACAACCTAA GAAGCGACAA CCGCATAGGC GCTAGCACTA TCACGATGCA AGTAGCTAGG ATGCTTGAAC CAAGTGATAG GAGCTATAAA AATAAGATAA GAGAAATTTT TAGAGCATTT CAGTTAGAGC TTCACTTTAG CAAGGATGAA ATTTTAAATT TATACCTAAA TTTAGCCCCA TATGGCGGCA ATATCGAGGG TGCAAAGGCG GCAAGCTTCT TTTACTTTGG CAAGGAGCTA AACGAGCTTA GCTACGCTCA GGCGGCACTT TTAAGCACGA TCCCTAAAAA TCCAAATAAA AATAGACTTG ACCGCGTCTC AAACATAAAC GCCCTAAAAA ACAGGGTAAT AAAGATGCTT TATAAGGCAA AGTTGATCGA TCTAAGTGCG TTTAAAAGAG CGCAGGCTGA GCCATTTAAA AATGTAAGGA TAAGAGCCGT CGTAAATGCT AGCGACTACG CAAATGTCGC TTTTAAAAAC CAAATTTCAA AGGCGAGTTT GGATCTAAAT TTACAAAAAG ATATGCTTAA AATTTTAAAA GATGCGATGT TTTCGCTAAA GGCTAAAAAT GCAAACAACG CCGCAGCCGT GGTCATCGAC AATAAAAAAA TGAGCGTTGT TGCCTTTATC GGCTCGCACG ATGAGCGCGC ACGCGACGGC AAAAACTCAG CCCTAAATAT GAAGCGAAAC ACCGGCAGCA CGCTAAAGCC TTTTATCTAC TCGCTAGCCC TTGATAGCGG GCTTATCACG CCAAACTCGC AGCTAATTGA CACGCAAATT TATATAAATG AATATGTGCC AAAGAACTTT AGTAACGACT TTTTGGGGCT TGTAAGCGCA AAGGACGCTC TAAATTTTAG CCTCAATATC CCAGTTATAA ATTTAGACTT AAAGCTAAAA GATAACTCGC TTTATGAGCT GCTTGAAAAG GTAAATTTAG TTGATGAAAA CAAGGAGTTT TACGGCTCTT CGATAGTTTT AGGCAGCGCT GAGATGAGCC TGATTGATCT TGCGCATCTT TATACGATAT ACGCAAATGG CGGGGTTTAT AGGCCACTTG AGTTTGCGGG TAAAAACTAC AAAAATGAAG ACAAAAACAT AACCCTCATC TCGCCTCAAA GTGCATATCT AACCGCCAAA ATGATGAGCG AGGCCTCAAG GTCGTATCTA AAAAATGCTT GGCAATACGC GCAAAACACG CCAAAAATCG CCTTTAAAAC AGGCACAAGT GCAAACTCAC GCGATCTTTA CGCCATAGGA GTTGATGAAG ACTACACAAT AGCCGTCTGG GTGGGCAACT TTAACGCCGA AAAAACTGAC AAACTAACTG GGCTAAATGA CGTCTCAAAG ATCGTTTTTG ATATGTTTAA ACTTATCGCT CAAAAAAGAA ATTTAAGCTT TATGAGCGAG CCAGAGGGCA TCGAAAAAGT GCCGACCTGC CTTGATGCTT TTAGCTATGA GACGTGCAAA AAAACGGCGC TTGATGATAG GATAGTTGGA GTTAAACTGC AAGATAAATG CGAGAGTTTA AGAGGCGAGG AGCTTGAGTT TTTGATAAAA AATGGCTTTT TAGACAAAGA CGAGGTCAAA AATAGCCCTT GCGCTGAAGT TTTTAAAGAT AAAAAGCCAG TTTTTGCCTA TCCGTATAAC GGCGAAGAGA TCGTGACAGA TGAAAATGTA ACACAAATTA TGCTAAAATG CTACGCGTTT TTAGGTGATG AAATTTACTT AAAAGTGGAT GATTTGAACT TTTCTAAGAT AGAAAATGCA AGTGAAAAAA GGCTAGATCT AACTCTTGGC GAGCACACTT TAAAATGCCT TGATCAAAAC TCAAATCAAA GTGAAATAAC AATAAAACTA AGGAGATAA
|
Protein sequence | MKKFKFLKFL ALFLALVVAI FLILDQIYPL NLDALKKDEA KILLDKNGEI INMKLSSDGI WRFHEQSFPN SLKQCVVLFE DRYFYYHFGV NFASIFRAFF HNLRSDNRIG ASTITMQVAR MLEPSDRSYK NKIREIFRAF QLELHFSKDE ILNLYLNLAP YGGNIEGAKA ASFFYFGKEL NELSYAQAAL LSTIPKNPNK NRLDRVSNIN ALKNRVIKML YKAKLIDLSA FKRAQAEPFK NVRIRAVVNA SDYANVAFKN QISKASLDLN LQKDMLKILK DAMFSLKAKN ANNAAAVVID NKKMSVVAFI GSHDERARDG KNSALNMKRN TGSTLKPFIY SLALDSGLIT PNSQLIDTQI YINEYVPKNF SNDFLGLVSA KDALNFSLNI PVINLDLKLK DNSLYELLEK VNLVDENKEF YGSSIVLGSA EMSLIDLAHL YTIYANGGVY RPLEFAGKNY KNEDKNITLI SPQSAYLTAK MMSEASRSYL KNAWQYAQNT PKIAFKTGTS ANSRDLYAIG VDEDYTIAVW VGNFNAEKTD KLTGLNDVSK IVFDMFKLIA QKRNLSFMSE PEGIEKVPTC LDAFSYETCK KTALDDRIVG VKLQDKCESL RGEELEFLIK NGFLDKDEVK NSPCAEVFKD KKPVFAYPYN GEEIVTDENV TQIMLKCYAF LGDEIYLKVD DLNFSKIENA SEKRLDLTLG EHTLKCLDQN SNQSEITIKL RR
|
| |