| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1188 |
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| Symbol | |
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| ID | 5597070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | + |
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| Start bp | 147250 |
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| End bp | 147771 |
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| Gene Length | 522 bp |
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| Protein Length | 173 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640928758 |
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| Product | secreted protein Hcp |
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| Protein accession | YP_001466074 |
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| Protein GI | 157165098 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
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| TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACAAC CAGTGTATAT TAAGGTGAAA GGTTCTACTC AAGGACTTAT CTCAAGTGGT
GCTTCAACAG AAGCTAGTAT CGGCAATCGC TATCAGTCAG GTCACGAAGA TGAGATCATG
GCACAAGAGG TTTCTCACAT CGTAACTGTT CCAGTGGATC CACAAAGTGG CCAACCATCA
GGACAAAGAG TACATAAGCC ATTTAGCTTT ACAACATCTT TAAATAAAGC TGTTCCACTT
CTTTACAATG CACTAACTCA AGGCGAGAGA CTTCCAGAGG TTGAGATCCA CTGGTACAGA
ACATCAACTA GCGGTGGCGC TGAGCACTTC TTCACTACAA AACTAGAAGA TGCAACTATA
ACAGATATCA CTCTAGTAAG TCCAAATGCT CAAGACAAGC TAAACAGCGA CAAAACTGAG
CTTTTCAAAG TTTCAATGAA CTATAGAAAG ATAGTTTGGG AGCACGTAGC TGCAGGCACA
AGCGGAAGCG ATGACTGGAG AGAAGCTACT AAAAAAGCTT AA
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| Protein sequence | MSQPVYIKVK GSTQGLISSG ASTEASIGNR YQSGHEDEIM AQEVSHIVTV PVDPQSGQPS
GQRVHKPFSF TTSLNKAVPL LYNALTQGER LPEVEIHWYR TSTSGGAEHF FTTKLEDATI
TDITLVSPNA QDKLNSDKTE LFKVSMNYRK IVWEHVAAGT SGSDDWREAT KKA
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