| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1178 |
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| Symbol | |
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| ID | 5597353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | + |
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| Start bp | 134253 |
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| End bp | 135611 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640928751 |
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| Product | type VI secretion protein |
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| Protein accession | YP_001466067 |
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| Protein GI | 157163890 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGTTG ATAAAGTTCA TTTCGAGCAG CAAGAGAGGT ATTTTGAGAG AAATTTAAAC
CTAAAAACCG TCTCGTCTTT TTCAAATTTA TATGGAGTTT TGGAGCTTGA GATCTCAAGC
GAGCTTTTGC TTCAAGGCAA GATAGGGCTA AATAAAATTT CTTGTATCTC GCAAGATGGT
ACGATATATA ACGCCCCAGA TCAAGACGAC CTACCAGAGC CTCTTGAGAT AAGCCCTAGC
GAGCTAAATT CTGCTGTCAT AGTGCTAAAG CTACCAGTTA GCTCAGGACT TGTTGATGTT
AGCTTGCAAA ACAACCTGCC AAATCTAAAA TTTACAGCTA AACAAGCGCT CATTAGCTCA
AGAGTGCATG ATGAAGCTAG CAACGATATC TTGAACGAGC TAGATGACAA ATACGACTTT
GAGCTTTCAT CTGCTTTTAC GCAGGATAAA GAAAATTTGA TCCTAGCAAG TCAAAGATCG
ACTCTAGGAG TGCTTGGCTC AAAAACGCCT TATGAGCTTA GCGTGCCTGT TTGCAGGATA
AAAAACATAG ATCTAAACAA ACAAATAACG CTCGATGAGA AATTTATACC AACTTGCATT
GATGTCAGTA AAAATTCTTT CATCACTAGC TTTATAGATG AGTTTAGCTT TGCTACAAAG
CAGCATCAAG AGAGCTACAC TGGGCTTTTA GGCGGTATAG ATCAGGCTAA AAATAGGCTT
GATATTTCAA CATATTTGAC GCTAAATATG CTTAAAAAAT GGCACTTGAT ATTCTCCTAT
CTTTTTAAAA GAGACAAAAT TCATCCAGAG TATCTATATG AAAAGCTAAT TGATTTTCAA
GCTGATCTGC TAGCTCTAAG TCACGATGAT AGTTTTAGCG AATTTATAGC TTATGATCAC
AACAACTTAA GTCAAACTTT TGTACCGCTA ATAAACAATC TTAGGCTTTT GTTCTCGCAT
ATCTTGTCGC CAAAATACGT CATGGCACAG ATCGTTAAAA ACAATCACGG CTTTTTTGAC
TGCGTCTTTG ATAATCCAAG CATCATAGAA AACTCAGAAA TTTACTTTGC TATCCATAGC
GATACAAAAA ATGAGTACCT GCTCAAAAAT TTCAAAGAAC AGTGCAAAAT TCACACCCAA
TCAAACATCA AAAGTATCGT CTCATCACAG CTTCGCGGCA TAAATGTAGA GCAAATTTCA
GCTATACCTA GTACATTGCC AAAGCTAAAT GACTATATCT ACTACAAGAT CGATAAAAAA
GATGAAATTT TTAAAAGCTT CGCAAATCAA AGCGTTATTA GCGTCTATAT AACAGCAAAT
TTATCAAACG CTGACATTAA GATGTGGGCT TTATTATAA
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| Protein sequence | MNVDKVHFEQ QERYFERNLN LKTVSSFSNL YGVLELEISS ELLLQGKIGL NKISCISQDG
TIYNAPDQDD LPEPLEISPS ELNSAVIVLK LPVSSGLVDV SLQNNLPNLK FTAKQALISS
RVHDEASNDI LNELDDKYDF ELSSAFTQDK ENLILASQRS TLGVLGSKTP YELSVPVCRI
KNIDLNKQIT LDEKFIPTCI DVSKNSFITS FIDEFSFATK QHQESYTGLL GGIDQAKNRL
DISTYLTLNM LKKWHLIFSY LFKRDKIHPE YLYEKLIDFQ ADLLALSHDD SFSEFIAYDH
NNLSQTFVPL INNLRLLFSH ILSPKYVMAQ IVKNNHGFFD CVFDNPSIIE NSEIYFAIHS
DTKNEYLLKN FKEQCKIHTQ SNIKSIVSSQ LRGINVEQIS AIPSTLPKLN DYIYYKIDKK
DEIFKSFANQ SVISVYITAN LSNADIKMWA LL
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