Gene CCC13826_1124 details

Gene Information

• Locus tag: CCC13826_1124
• Symbol: typA
• ID: 5596863
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter concisus 13826
• Kingdom: Bacteria
• Replicon accession: NC_009802
• Strand: +
• Start bp: 86450
• End bp: 88252
• Gene Length: 1803 bp
• Protein Length: 600 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640928698
• Product: GTP-binding protein TypA/BipA
• Protein accession: YP_001466014
• Protein GI: 157165061
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.143451
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGAAAAGA TACGAAATAT AGCCGTTATC GCGCACGTCG ACCACGGTAA GACAACAATG 
GTTGATGAGC TTTTGAAGCA GTCAGGAACA TTTAACGAGC ATCAAAACCT TGGCGAGCGT 
GTAATGGATA GCAACGACAT CGAAAGAGAG CGTGGCATCA CGATCCTTTC TAAAAACACC 
GCCATTCGCT ACAAAGATAC AAAGATCAAC ATCATCGACA CCCCAGGCCA CGCCGACTTT 
GGTGGCGAGG TAGAGCGTGT TCTTAAGATG GTTGATGGCG TTTTACTGCT TGTTGATGCA 
CAAGAAGGCG TTATGCCACA AACTAAATTT GTCGTTAAAA AGGCGCTTTC ACTTGGACTT 
CGCCCAATCG TCGTCGTAAA TAAGATAGAT AAGCCTGCAG GCGATCCAGA CCGCGTTATA 
AATGAAATTT TTGACCTTTT TGTCGCACTT GATGCAAACG ATGAGCAGTT AGAATTTCCA 
GTCGTTTATG CCGCTGCTAA AAATGGCTAC GCAAAGCTAA AGCTAAGTGA TGAAAACAAA 
GATATGCAGC CACTTTTCGA GACTATCCTA GCTCATGTGC CAGCTCCAAG CGGTAGTGAC 
GAGAACCCAC TCCAGCTTCA GGTTTTCACG CTTGATTATG ACAACTACGT CGGCAAGATC 
GGCATTGCGA GGATTTTTAA CGGCAAGATA GCTAAAAACC AAAACGTCAT GCTTGCAAAG 
GCTGATGGCA CAAAAACAAC TGGCAGAATT TCAAAACTCA TCGGCTTTAT GGGACTTGAT 
AGGATCGATA TAAACGAGGC TGGCACTGGC GACATCGTAG CGATCGCTGG CTTTGACGCG 
CTTGACGTTG GTGATAGCGT CGTTGATCCA AACAACCCAC ATCCGCTTGA TCCGCTCCAT 
ATCGAAGAGC CAACCCTTAG CGTTGTATTT TCTGTAAATG ACGGCCCACT AGCAGGCACT 
GAGGGCAAAC ACGTCACATC AAACAAGATC GATGAGCGCC TTGCAAACGA GATGAAGACA 
AATATCGCGA TGAAGTATGA AAACATCGGC GAGGGCAAAT TTAAAGTAAG CGGCCGTGGC 
GAGCTTCAGA TCACCATTTT GGCTGAAAAT ATGCGCCGCG AGGGCTATGA GTTTTTACTT 
GGCAGACCTG AGGTCATCGT AAAAGAGATA AACGGCGTAA AATGCGAGCC ATACGAGCTT 
TTAGTCATCG ATGCGCCTGA TGATACGACA GGCACAGTCA TCGAAAAACT AGGCAAAAGA 
AAAGCTGAAA TGGTCTCTAT GAACCCAACA GGCGACGGCC AAACAAGGAT CGAATTTGAG 
ATCCCAGCTC GCGGTCTTAT CGGCTTTAGA AGCCAGTTTT TGACTGATAC AAAAGGCGAG 
GGCGTTATGA ACCATAGCTT TTTGGAGTTT AGACCACTAA GCGGCACCGT CGAGCACAGA 
ACAAACGGCG CGCTAGTTTC TATGGAAAAC GGCGTAACGC TTGCTTATTC GCTATTTAAC 
TTGCAAGATC GTGGTGTGCT ATTTCTTGAT CCGCAAGCAA AAGTCTATGT GGGCATGATC 
ATCGGCGAGC ACAGCCGTCC AAACGACCTT GATGTAAATC CTATCAAGGG CAAAAACCTA 
ACAAACGTGC GTGCAAGCGG TAGTGACGAT GCGATCAAGC TTGTGCCACC TAGAAAGCTA 
AGCCTTGAGC GCGCGTTAGA GTGGATCGAG GATGACGAGC TAGTTGAGGT TACACCTATA 
AATATCCGCG TTCGCAAGCG CTATCTAGAC CCAACAGAGC GCAAAAGAAA AGCAAAACTA 
TAA 

 

Protein sequence

MEKIRNIAVI AHVDHGKTTM VDELLKQSGT FNEHQNLGER VMDSNDIERE RGITILSKNT 
AIRYKDTKIN IIDTPGHADF GGEVERVLKM VDGVLLLVDA QEGVMPQTKF VVKKALSLGL 
RPIVVVNKID KPAGDPDRVI NEIFDLFVAL DANDEQLEFP VVYAAAKNGY AKLKLSDENK 
DMQPLFETIL AHVPAPSGSD ENPLQLQVFT LDYDNYVGKI GIARIFNGKI AKNQNVMLAK 
ADGTKTTGRI SKLIGFMGLD RIDINEAGTG DIVAIAGFDA LDVGDSVVDP NNPHPLDPLH 
IEEPTLSVVF SVNDGPLAGT EGKHVTSNKI DERLANEMKT NIAMKYENIG EGKFKVSGRG 
ELQITILAEN MRREGYEFLL GRPEVIVKEI NGVKCEPYEL LVIDAPDDTT GTVIEKLGKR 
KAEMVSMNPT GDGQTRIEFE IPARGLIGFR SQFLTDTKGE GVMNHSFLEF RPLSGTVEHR 
TNGALVSMEN GVTLAYSLFN LQDRGVLFLD PQAKVYVGMI IGEHSRPNDL DVNPIKGKNL 
TNVRASGSDD AIKLVPPRKL SLERALEWIE DDELVEVTPI NIRVRKRYLD PTERKRKAKL