Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_1124 |
Symbol | typA |
ID | 5596863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | + |
Start bp | 86450 |
End bp | 88252 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640928698 |
Product | GTP-binding protein TypA/BipA |
Protein accession | YP_001466014 |
Protein GI | 157165061 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.143451 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAAAAGA TACGAAATAT AGCCGTTATC GCGCACGTCG ACCACGGTAA GACAACAATG GTTGATGAGC TTTTGAAGCA GTCAGGAACA TTTAACGAGC ATCAAAACCT TGGCGAGCGT GTAATGGATA GCAACGACAT CGAAAGAGAG CGTGGCATCA CGATCCTTTC TAAAAACACC GCCATTCGCT ACAAAGATAC AAAGATCAAC ATCATCGACA CCCCAGGCCA CGCCGACTTT GGTGGCGAGG TAGAGCGTGT TCTTAAGATG GTTGATGGCG TTTTACTGCT TGTTGATGCA CAAGAAGGCG TTATGCCACA AACTAAATTT GTCGTTAAAA AGGCGCTTTC ACTTGGACTT CGCCCAATCG TCGTCGTAAA TAAGATAGAT AAGCCTGCAG GCGATCCAGA CCGCGTTATA AATGAAATTT TTGACCTTTT TGTCGCACTT GATGCAAACG ATGAGCAGTT AGAATTTCCA GTCGTTTATG CCGCTGCTAA AAATGGCTAC GCAAAGCTAA AGCTAAGTGA TGAAAACAAA GATATGCAGC CACTTTTCGA GACTATCCTA GCTCATGTGC CAGCTCCAAG CGGTAGTGAC GAGAACCCAC TCCAGCTTCA GGTTTTCACG CTTGATTATG ACAACTACGT CGGCAAGATC GGCATTGCGA GGATTTTTAA CGGCAAGATA GCTAAAAACC AAAACGTCAT GCTTGCAAAG GCTGATGGCA CAAAAACAAC TGGCAGAATT TCAAAACTCA TCGGCTTTAT GGGACTTGAT AGGATCGATA TAAACGAGGC TGGCACTGGC GACATCGTAG CGATCGCTGG CTTTGACGCG CTTGACGTTG GTGATAGCGT CGTTGATCCA AACAACCCAC ATCCGCTTGA TCCGCTCCAT ATCGAAGAGC CAACCCTTAG CGTTGTATTT TCTGTAAATG ACGGCCCACT AGCAGGCACT GAGGGCAAAC ACGTCACATC AAACAAGATC GATGAGCGCC TTGCAAACGA GATGAAGACA AATATCGCGA TGAAGTATGA AAACATCGGC GAGGGCAAAT TTAAAGTAAG CGGCCGTGGC GAGCTTCAGA TCACCATTTT GGCTGAAAAT ATGCGCCGCG AGGGCTATGA GTTTTTACTT GGCAGACCTG AGGTCATCGT AAAAGAGATA AACGGCGTAA AATGCGAGCC ATACGAGCTT TTAGTCATCG ATGCGCCTGA TGATACGACA GGCACAGTCA TCGAAAAACT AGGCAAAAGA AAAGCTGAAA TGGTCTCTAT GAACCCAACA GGCGACGGCC AAACAAGGAT CGAATTTGAG ATCCCAGCTC GCGGTCTTAT CGGCTTTAGA AGCCAGTTTT TGACTGATAC AAAAGGCGAG GGCGTTATGA ACCATAGCTT TTTGGAGTTT AGACCACTAA GCGGCACCGT CGAGCACAGA ACAAACGGCG CGCTAGTTTC TATGGAAAAC GGCGTAACGC TTGCTTATTC GCTATTTAAC TTGCAAGATC GTGGTGTGCT ATTTCTTGAT CCGCAAGCAA AAGTCTATGT GGGCATGATC ATCGGCGAGC ACAGCCGTCC AAACGACCTT GATGTAAATC CTATCAAGGG CAAAAACCTA ACAAACGTGC GTGCAAGCGG TAGTGACGAT GCGATCAAGC TTGTGCCACC TAGAAAGCTA AGCCTTGAGC GCGCGTTAGA GTGGATCGAG GATGACGAGC TAGTTGAGGT TACACCTATA AATATCCGCG TTCGCAAGCG CTATCTAGAC CCAACAGAGC GCAAAAGAAA AGCAAAACTA TAA
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Protein sequence | MEKIRNIAVI AHVDHGKTTM VDELLKQSGT FNEHQNLGER VMDSNDIERE RGITILSKNT AIRYKDTKIN IIDTPGHADF GGEVERVLKM VDGVLLLVDA QEGVMPQTKF VVKKALSLGL RPIVVVNKID KPAGDPDRVI NEIFDLFVAL DANDEQLEFP VVYAAAKNGY AKLKLSDENK DMQPLFETIL AHVPAPSGSD ENPLQLQVFT LDYDNYVGKI GIARIFNGKI AKNQNVMLAK ADGTKTTGRI SKLIGFMGLD RIDINEAGTG DIVAIAGFDA LDVGDSVVDP NNPHPLDPLH IEEPTLSVVF SVNDGPLAGT EGKHVTSNKI DERLANEMKT NIAMKYENIG EGKFKVSGRG ELQITILAEN MRREGYEFLL GRPEVIVKEI NGVKCEPYEL LVIDAPDDTT GTVIEKLGKR KAEMVSMNPT GDGQTRIEFE IPARGLIGFR SQFLTDTKGE GVMNHSFLEF RPLSGTVEHR TNGALVSMEN GVTLAYSLFN LQDRGVLFLD PQAKVYVGMI IGEHSRPNDL DVNPIKGKNL TNVRASGSDD AIKLVPPRKL SLERALEWIE DDELVEVTPI NIRVRKRYLD PTERKRKAKL
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