Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_1122 |
Symbol | flgD |
ID | 5597215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | - |
Start bp | 84172 |
End bp | 84879 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640928696 |
Product | flagellar basal body rod modification protein |
Protein accession | YP_001466012 |
Protein GI | 157165774 |
COG category | [N] Cell motility |
COG ID | [COG1843] Flagellar hook capping protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.957551 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTCAG TTTCAGATAT AACGACACAA ACAACGCAGC AAAAAAACGC CGAGAAAAAG GCTAACTCTA GAATAGACGC GGCAAAAGGC ACAGGCACAA ACCCAAATTC ACAGCTTGAC AAAGATGCAT TTATGAAGCT ACTTTTAACA GAGCTTCAGC ACCAAGACCC AACAAGCCCT ATGGATACTG AAAAGATGCT AACGCAAACT AGCCAGCTAG CGTCAGTCGA GATGCAAGAA AATACAAACA AAGCGATGAA AGAGCTAGTA AATCAGCTAA AATCAAACGC AAACGCCTAC GCTATCTCAG CCCTTGGCAA GATGGTCTCA ACTGGCTCAA ATGCAGTCAC ACTAACAGAT GAGAAAAAAG ATGCAAAATT TGCGCTTTAC TTTAAGACAG ATCTTGCAAA TGGCAAAATC GAGGTCAAAA ACGCAAATGG TCAAGTCGTA AGAACAACTG ATCTAAATGA GACAAATGCA GGCGTTCATA ACCTAGCTTG GGACGGCAAA GACGCGTCTG GCAACCAAGT GCCAAATGGC TCATATACTA TCTCAGCGAC TTACACTGGC AAAGATGGCA AAGAGTATAA AACACAAGTA GGCAACTACC CAGTCGAGGC GGTGAAATTT GTAGATGGCA AGGCTATGAT GAAGGTAGCT GGCGAATACG TTTCAATGGA TAAAGTATCT GAATATTACG AGGGCTAA
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Protein sequence | MASVSDITTQ TTQQKNAEKK ANSRIDAAKG TGTNPNSQLD KDAFMKLLLT ELQHQDPTSP MDTEKMLTQT SQLASVEMQE NTNKAMKELV NQLKSNANAY AISALGKMVS TGSNAVTLTD EKKDAKFALY FKTDLANGKI EVKNANGQVV RTTDLNETNA GVHNLAWDGK DASGNQVPNG SYTISATYTG KDGKEYKTQV GNYPVEAVKF VDGKAMMKVA GEYVSMDKVS EYYEG
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