| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1098 |
|---|
| Symbol | |
|---|
| ID | 5596053 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | - |
|---|
| Start bp | 1045753 |
|---|
| End bp | 1047015 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640929601 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001466892 |
|---|
| Protein GI | 157165654 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4872] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00466748 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTTT ACAATAGAAA TTTTCTAGCC AAAGAGCTAG ATCGCTGGCA AAAAGAGGAT
GTGATCGATA AGGTCACCGC TTTAAAGATA GCAAATTTAT ATGATATAGA TATAAACGCT
CATAGCGAAA AGACTAGCTT TATCTTAAAG TTGGTTGCCT ATCTCTTTTT CGCGCTGGCA
TTTTTTACTC TGGTTGGAGC CTACTGGGAG GAGATACCAA GGATGGGGCG CCTTGTTATC
ATCTTTGGAG TGCTTGCTCT TTTAAATTTT GGCGGAGTTT ATTATCTAAA AAAGGGCAAA
GATAAGCTTG GCACAGCCAC GCTCTTTTTG GGAAATTTCT GCTACGGAGC AGCCATAGCG
CTTATCGCTC AAATTTATAA TATTAGCGAT GAGCCAAGCG GTGGAGTTTT GCTCTGGAGC
GTTGGAGCTA TGGCTCTCTC TTTTGCTAGC AAAAAGGGTC TGCTAGTGGC TCAAAGCCTT
GTTTTTGCGA CGATCTGGTT TGTTTTAAAG GGCACGGGCG GCGAGTTTGC TTATGAATTT
ATCGTCTTTA TAGCCCTTGG CGCCTACACG CTTTATAAAA GTGACTCTAT TTTTCTTGCT
ACCATGCTTT TAGCGGATAT ATTTTTCTAC ATCGTTTCGC TTTGCGCTAG GATCAGTGGG
TTTAACGAAT TTTATGGCTA TGATCTTATG TTTAGAGCGC CGATGGCTGC TACTTTATCG
CTCTCATACG CGCTTTTACT TGTCGCGCTC TTTAGCCCGT TAGCTGACTT TAGAGATAGG
CTAGCGCACC TTGTAAAAGG CTTTGGCAAG TATCTTGGCA TCATTATCTT GATCGTTTGC
TTGATAGCTT ATGCAAATGG CGATATCTAC GAGCTAGAAG AAGATAAATT TTGGTTTGCA
AAAGCATTTT TTTATAGCAG TTTTGGCAAG GTTTTTGCCG TATTTGGCAT CGCTAGCATT
GCGCTATTTT TCAAAGAGAA AAACAAAAGT GGCCTGCTTC TTGGCTTGAT ACTCTTTGCG
TTGCCATTTG TCTTTAGCTT GGGCGTTGGA TATGCAAATA TCTTCTTCTC GCTAGCAAAC
ATCATCGTTG CAGCCGTGCT TATCAAAAAT GGCGAGCTAA CGCTTGGCCT TTGTATGATA
TTCTTAGTTG CTGTGATTAG ATACTTTGAG CTAATAGGCG ATTATTTGGG GGCTACGGCG
CTATTTATCA TCTTTGCCTT CGTCGTGCTC GCAGTTGCCG CTAAAAAAGG ACGTACAAAA
TGA
|
|---|
| Protein sequence | MNFYNRNFLA KELDRWQKED VIDKVTALKI ANLYDIDINA HSEKTSFILK LVAYLFFALA
FFTLVGAYWE EIPRMGRLVI IFGVLALLNF GGVYYLKKGK DKLGTATLFL GNFCYGAAIA
LIAQIYNISD EPSGGVLLWS VGAMALSFAS KKGLLVAQSL VFATIWFVLK GTGGEFAYEF
IVFIALGAYT LYKSDSIFLA TMLLADIFFY IVSLCARISG FNEFYGYDLM FRAPMAATLS
LSYALLLVAL FSPLADFRDR LAHLVKGFGK YLGIIILIVC LIAYANGDIY ELEEDKFWFA
KAFFYSSFGK VFAVFGIASI ALFFKEKNKS GLLLGLILFA LPFVFSLGVG YANIFFSLAN
IIVAAVLIKN GELTLGLCMI FLVAVIRYFE LIGDYLGATA LFIIFAFVVL AVAAKKGRTK
|
|---|
| |