| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1092 |
|---|
| Symbol | hypA |
|---|
| ID | 5595947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | - |
|---|
| Start bp | 1041500 |
|---|
| End bp | 1041841 |
|---|
| Gene Length | 342 bp |
|---|
| Protein Length | 113 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640929595 |
|---|
| Product | hydrogenase nickel insertion protein HypA |
|---|
| Protein accession | YP_001466886 |
|---|
| Protein GI | 157165308 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) |
|---|
| TIGRFAM ID | [TIGR00100] hydrogenase nickel insertion protein HypA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.535933 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACGAGC TTAGTATCGT TCAAAATTTA GTCAGCCTTT GCGAGAAAAA TGCTGCCAAA
GAAAACTCCA AAGAGATAAG TAAGATCGAG ATAAAAGTTG GCCGCTTAAG CGGAGTGGAG
CCACACTATC TGGAGAGCGC CTTTGATGTT TATAAGGCTG GCACGATCTG CGAAAACGCC
GAGCTTGTCA TAAATTTACA AGGCATTGTC GTAGAGTGTT TGGATTGTGG ATTTGGCGGG
GAGCTTAGTG AAAATGACTT CACCTGCCCA AAGTGCAAAA GCCAAAATTT AAAGGTGACT
GACGGCGAGG ATATGTATCT CATGCGCCTT GAGATGAAGT AA
|
|---|
| Protein sequence | MHELSIVQNL VSLCEKNAAK ENSKEISKIE IKVGRLSGVE PHYLESAFDV YKAGTICENA
ELVINLQGIV VECLDCGFGG ELSENDFTCP KCKSQNLKVT DGEDMYLMRL EMK
|
|---|
| |