| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1075 |
|---|
| Symbol | |
|---|
| ID | 5596501 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | + |
|---|
| Start bp | 810371 |
|---|
| End bp | 811690 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640929375 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001466671 |
|---|
| Protein GI | 157164403 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000929546 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGATC AAATTTTAGA AATTTTATCT CGCTCAAACG TCTTTTTAAC TGGCGGTGGC
GGTGTTGGCA AGAGCTATCT AACCGCTTCT ATCATCAGAC ACTACAAAGA AAATTTCAAA
AATGTCGTCA TCCTTGGCTC AACTGGCATA AGCGCTGTTA GCCTTGGGGG CGTGAGCTTG
CATAGCTTTT TTAAATTTGG CTACTGCAAG GACTACGAGG AGCTAAGACG GCTTGACTAC
CGCCAAAAAG ATAAGCTAAG CAAGCTACGA AATATGCTAG ATGCTTGCGA TCTGCTTGTA
ATTGATGAAA TTTCGATGGT TAGCTCAAAC GTGATGGAGA TGATAAGATA CCGCTTGCTC
ACCTCTAAAT TTAAGGGCAG GGTGCTTATA GTGGGCGACT TTTACCAGCT CCCGCCGGTG
CAAAAAGAGC AAAATGAGAG CAAACTTTTT AACTTTTTAT ACGCCTTTAA CTCCAGTGCG
TGGGAGGATA TGAAATTTAC AAATGTCGAG CTGCTCGTCT CAAAACGCAC AAATGATCTT
AAATTTTATG AAATTCTCTC TCGTCTTAGA GTTGGCGAGC TAGATGATGA GATGATAGCT
TACATCGAGG GTCTGCGAGT GGATGCCATT GAGCCAGATA GCGAGACTAG CGTGCTATTT
GGCAGAAATG CTGAGGCTGA GATGCTAAAT CAAAAAAGAC TTCTTGCGCT TAATGCGCCT
CTTGAAATTT CAAACTCGGA CGTGCTTGTT ATGGATGAAA ATTTAGACAA AAAAGAGTTT
GAAAAGTGGG CAAATACGCT AAATATCTCG CGAAATTTAG AGATGAAGAT AGGGGCTAAG
ATTATCTTTA CTTCAAATAA ATGGGGCGAG TACTACAACG GCGAGCAGGG CAAGATCATG
CAAATTTTAA AAGAAAATGG CGCCATTTCA AGCGTGATCG TGCAAAAAGA TAGCGGCGAG
ATCTGCGAGA TAGAAAAGTG CGCTTATAAC TTTTGCGCGC TAAATTTAAA CGAAGATGAG
ATCGAGGAGA ACGTGCAGGC TTCGCTTTAT CAGTTTCCAT TTAAACTTGC CTATGCGCTA
ACTATCCACA AGTCTCAGGG TATGAGCATA AATTCGCTCA TTTGCAACAT CAACCACATC
TTTGCCAAAG GTCAGCTCTA CGTCGCACTT TCTCGCGCGG TAAATCCTAA AAATTTAAAA
CTTTTTTATG ATAAGAAAAG TGATTTTAGG CAGCATTTAA GAAAAGTGGT TAAAATTGAC
GACGAAGTTA AGAAATTTTA CCAAGAAAAC GTATTTTTGC ATATTAAGGA GAGTTTATGA
|
|---|
| Protein sequence | MKDQILEILS RSNVFLTGGG GVGKSYLTAS IIRHYKENFK NVVILGSTGI SAVSLGGVSL
HSFFKFGYCK DYEELRRLDY RQKDKLSKLR NMLDACDLLV IDEISMVSSN VMEMIRYRLL
TSKFKGRVLI VGDFYQLPPV QKEQNESKLF NFLYAFNSSA WEDMKFTNVE LLVSKRTNDL
KFYEILSRLR VGELDDEMIA YIEGLRVDAI EPDSETSVLF GRNAEAEMLN QKRLLALNAP
LEISNSDVLV MDENLDKKEF EKWANTLNIS RNLEMKIGAK IIFTSNKWGE YYNGEQGKIM
QILKENGAIS SVIVQKDSGE ICEIEKCAYN FCALNLNEDE IEENVQASLY QFPFKLAYAL
TIHKSQGMSI NSLICNINHI FAKGQLYVAL SRAVNPKNLK LFYDKKSDFR QHLRKVVKID
DEVKKFYQEN VFLHIKESL
|
|---|
| |