| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1073 |
|---|
| Symbol | lolA |
|---|
| ID | 5596157 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | - |
|---|
| Start bp | 812254 |
|---|
| End bp | 812766 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640929377 |
|---|
| Product | outer-membrane lipoprotein carrier protein |
|---|
| Protein accession | YP_001466673 |
|---|
| Protein GI | 157165665 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00225889 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAAAT TTTTAGTTGC ATCTCTTGTC GCAGTTTGCT CATTTGGCGC TGGCTTAAAT
TTTAAAAGCC TGCAAAGTGA CTTTACTCAA ACTGTCTTTA GCGAGGGCAA AAGTGTAAAT
TATAAGGGTA GATTTTACGC TAAAAGCGAC AACACCGCGC TTTGGATATA TGAAAGTCCA
ACACCAAAGA GAATTTACTT TGACAAAGAC AAGGTGGTCG TGATCGAAGA TGAGCTCGAG
CAAGCCATCA TCTCAAGGCT AGATGATACG CCAAATTTGA CGCAGGTTTT GGCTCACGCA
GAGCAAATTC AGCCGACACT TTATAAGGCG ATATATGACG GAGTTGAGTA CTTTATAACG
ATCAAAAACA CGCTTCCAAC GACGATTGAT TATAAAGACA AACTCTCAAA TAAGATAAAG
ATCACTCTAA GCAACCCTGT AAAAGACGCG CTCATCCCAA AAGAGACGCT AACTCCAGTC
ATCCCACAAG GTTACGACAT CGTAAATCAA TAA
|
|---|
| Protein sequence | MRKFLVASLV AVCSFGAGLN FKSLQSDFTQ TVFSEGKSVN YKGRFYAKSD NTALWIYESP
TPKRIYFDKD KVVVIEDELE QAIISRLDDT PNLTQVLAHA EQIQPTLYKA IYDGVEYFIT
IKNTLPTTID YKDKLSNKIK ITLSNPVKDA LIPKETLTPV IPQGYDIVNQ
|
|---|
| |