Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_1039 |
Symbol | |
ID | 5595796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | - |
Start bp | 842481 |
End bp | 844451 |
Gene Length | 1971 bp |
Protein Length | 656 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640929408 |
Product | protease htpx |
Protein accession | YP_001466704 |
Protein GI | 157165044 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0758551 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTGC GTAGCATCTT AGTCAAGGTC TCAGCGATCA TCGCTTTAGT TCTTGCCATT TGTATGGCTT GCTTTGTATT TTTTATATCA CATGTCTTAG AGCGTGAGAT CAAGGAGGGA GTAGAAACAA CTATCCAGCA AAACGTTTCA CTTGCAATGG ATACGGTTGA GCTATTTGAT GAAGATAACG AAGATAATGC AAAACTATAT ATGCATATCT TAAAAGAGGC TTTAGGCAAC ATAAGAGCCA CTAGCCAAAC CATAAAAACA GAAAATGACG ATGCTGTAGA GCTTATCTCA GATAAAATGG GCGTGCTAAA TAACAACCAT GAAATTTCTG ATAAGATCAA AAAACTAACA AACGGCGGTA TCCCAACTAT CTTTGCAAAA TCAGGCAATG AATTTGCTGC TGTATCTACT TCACTTTTAC TAGATGATGG CAGTAGAGCG CTTGGTATGC TAAATAAAAC GATCTATCCA AAGATGATGA ACAAAGAGAC ATATGTGGGT GCTTTAAATA TTTTTGGTAG AAACTATATG TGTGTTTATG AGCCAGTCAT TCAAAACGGC GAAGTTGTAG CAGTTTTATT TATAGGTTAT GACTTCACTG AAGGCCTAGA AGATCTTCAA AAGACAATGG CACAAATGAA GCTAGGCGAG CGTGGATACT TCTCAATCTT TAATACAAAG ACAAATGTCT ATGACATCCA CCCAAAACTA GCTGGCAAAG CACCAGAAGG TCAGCTAAAA GATATAGTTG ATGACATAGT AAAAACTAAA GAAGGTGTCA AACTCATAAA TACTGATGGA GTTGAGAGAG TGGTTGCTTT TGAGCCATTT GATAAGCTTA ACTGGATAGT GCTTGGCTCA GCTGTGACCG ATGACTTTTT AACACCTCTA AAAGTGGTTA GCAAAAACTT CATCATAGCA AGCATTATAG TTACATTGCT TCTTATCATA GTATCTATCT TCTTGCTTAA AAAGCTAGTT GCAAATCCTA TTGATAGACT AGGAGCAAAT TTAAATTCTA TAACATCTGA CTTTACTCTT AAAATTCCAA TCTACGGCAA AGATGAGATA GCTAAAATAA GCAATGATAT AAATAACTTC ATAGAGCGCA TAAGGGTGCT TATAAGCGAC ACTAAAAACC TCTCAAGTGA AAACAGCTCA GTTGCTAACG AGCTAAGCTC TACCTCACTT CAAACAGGCA AACGCGTAGA AGAATCAACC CAGATCGTTG AAGAGACAAA TCAAAGATGT AAGTCTATGC AAGAAGCTAT GAAAGAGTCA CTTTCAATTG CTCAAGCTGG CAAAGATGAC CTTCAAAAGG CAAGCACTCA TATAAAAACA GCTACTGAGG CTATCAGAGC CCTATCATCT CAGATCATAG ACTCTGCTAA TGTAGAAAAT CAAATGGCTG GCAAGATCGA GCAGCTTAGC CGTGATGCAG AGCAGGTTAA ATCAGTGCTT GTTGTTATCA ACGATATAGC TGATCAGACA AACCTACTTG CTCTTAACGC AGCCATTGAG GCAGCTCGTG CAGGTGAGCA TGGACGTGGC TTTGCAGTCG TTGCTGACGA GGTTAGACAG CTAGCTGAGA GAACTCAAAA GTCTCTAACA GAGATAAATG CAACTATCAA CGTTATCGTT CAAGCGATAA ATGATAGCAG CGAGCAAATG GGTATCAACT CTAAACAAAT TCAAGAGCTA ACCCACGTTG CAAGCGACGT TGAAAAGACG ATAAATGATA TGAGTGCAAC GATGAATAAC GCCATAGCGA TGTCTGACAA GACTATGCAA GACTACATCG CAACTGGTAA AAACGTAAAT GAGATCATGG ATGGCATCTC AGAGATCAAT CAAATTTCAT CTGAAAATGC TAGAAGCGTC GAAGAGATAG CTTCTGCAGC TGAACATCTA AATAAGATGA CAGATGCGCT AAATACTAAA CTAAGCGTCT TTAGAACTTA A
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Protein sequence | MNLRSILVKV SAIIALVLAI CMACFVFFIS HVLEREIKEG VETTIQQNVS LAMDTVELFD EDNEDNAKLY MHILKEALGN IRATSQTIKT ENDDAVELIS DKMGVLNNNH EISDKIKKLT NGGIPTIFAK SGNEFAAVST SLLLDDGSRA LGMLNKTIYP KMMNKETYVG ALNIFGRNYM CVYEPVIQNG EVVAVLFIGY DFTEGLEDLQ KTMAQMKLGE RGYFSIFNTK TNVYDIHPKL AGKAPEGQLK DIVDDIVKTK EGVKLINTDG VERVVAFEPF DKLNWIVLGS AVTDDFLTPL KVVSKNFIIA SIIVTLLLII VSIFLLKKLV ANPIDRLGAN LNSITSDFTL KIPIYGKDEI AKISNDINNF IERIRVLISD TKNLSSENSS VANELSSTSL QTGKRVEEST QIVEETNQRC KSMQEAMKES LSIAQAGKDD LQKASTHIKT ATEAIRALSS QIIDSANVEN QMAGKIEQLS RDAEQVKSVL VVINDIADQT NLLALNAAIE AARAGEHGRG FAVVADEVRQ LAERTQKSLT EINATINVIV QAINDSSEQM GINSKQIQEL THVASDVEKT INDMSATMNN AIAMSDKTMQ DYIATGKNVN EIMDGISEIN QISSENARSV EEIASAAEHL NKMTDALNTK LSVFRT
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